RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CCNT2O60583 730 aaKnown RBP13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 DNAJB6O75190 326 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 CD96P40200 585 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 RAB38P57729 211 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 OLR1P78380 273 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 BTG2P78543 158 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 RBPJQ06330 500 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 CHIT1Q13231 466 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 TUBA3CQ13748 450 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 SLMAPQ14BN4 828 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 TRADDQ15628 312 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 C18orf21Q32NC0 220 aaPredicted RBP13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 MTFR2Q6P444 385 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 ABHD17CQ6PCB6 329 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 TUBA3EQ6PEY2 450 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 CRLF3Q8IUI8 442 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 LAS2Q8IYD9 372 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 BEST3Q8N1M1 668 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 UBTD2Q8WUN7 234 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 TSLPQ969D9 159 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 RELTQ969Z4 430 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 TAAR6Q96RI8 345 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 ATOH8Q96SQ7 321 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 FUT8Q9BYC5 575 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 ALG9Q9H6U8 611 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 COPS7BQ9H9Q2 264 aaPredicted RBP13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 LYRM4Q9HD34 91 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 OPTCQ9UBM4 332 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 TMCO1Q9UM00 188 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 SPACA6W5XKT8 324 aa13.62□□□□□ -0.23
NIF3L1-205ENST00000409588 E2F3O00716 465 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 UGDHO60701 494 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 CTNSO60931 367 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 KLHL2O95198 593 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 C2P06681 752 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 TYK2P29597 1187 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 EEF1DP29692 281 aaKnown RBP13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 HNRNPH1P31943 449 aaKnown RBP13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 TRHRP34981 398 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 PIK3CBP42338 1070 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 PIK3CGP48736 1102 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 CYB561P49447 251 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 CLCN2P51788 898 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 SLC7A5Q01650 507 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 RUNX2Q13950 521 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 OR1C1Q15619 314 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 LIPJQ5W064 366 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 MED27Q6P2C8 311 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 MAMDC2Q7Z304 686 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 SCUBE1Q8IWY4 988 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 CYP4X1Q8N118 509 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 C17orf53Q8N3J3 647 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 TMEM132CQ8N3T6 1108 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 MDS2Q8NDY4 140 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 NFAM1Q8NET5 270 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 B3GNT7Q8NFL0 401 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 CMTM7Q96FZ5 175 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 SCMH1Q96GD3 660 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 QRFPRQ96P65 431 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 CENPKQ9BS16 269 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 DEFB126Q9BYW3 111 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 UNKQ9C0B0 810 aaKnown RBP13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 CDCP1Q9H5V8 836 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 PRDM7Q9NQW5 492 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 PRTFDC1Q9NRG1 225 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 IGSF5Q9NSI5 407 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 MS4A12Q9NXJ0 267 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 DAPP1Q9UN19 280 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 OSGIN2Q9Y236 505 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 PCDHGA11Q9Y5H2 935 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 IKBKGQ9Y6K9 419 aa13.61□□□□□ -0.23
NIF3L1-205ENST00000409588 MAST4O15021 2626 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 CTAGE15A4D2H0 777 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 GABRR3A8MPY1 467 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 FAM227AF5H4B4 570 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 LRRTM2O43300 516 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 FAM155BO75949 473 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 B3GALT4O96024 378 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 SP1P08047 785 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 MAOAP21397 527 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 CNTFP26441 200 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 SERPINB9P50453 376 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 TDGF1P3P51864 188 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 PLA2G16P53816 162 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 ALDH18A1P54886 795 aaKnown RBP13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 MLF1P58340 268 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 SLC13A2Q13183 592 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 SERTAD2Q14140 314 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 NAA30Q147X3 362 aaPredicted RBP13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 AP5B1Q2VPB7 878 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 MROH9Q5TGP6 573 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 SLC25A25Q6KCM7 469 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 TAOK1Q7L7X3 1001 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 CMC1Q7Z7K0 106 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 CTAGE6Q86UF2 777 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 ZNF473Q8WTR7 871 aaKnown RBP13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 THAP3Q8WTV1 239 aaPredicted RBP13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 DAZLQ92904 295 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms