RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RGMAQ96B86 450 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 MESP1Q9BRJ9 268 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SNX6Q9UNH7 406 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SAP18O00422 153 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 CDC123O75794 336 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 DNAJB5O75953 348 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 OR4F21O95013 312 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SCELO95171 688 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 C8orf89P0DMQ9 161 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 HIST1H1TP22492 207 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 ATP5A1P25705 553 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 CERS1P27544 350 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 TSFMP43897 325 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 CHAF1BQ13112 559 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 KCNAB2Q13303 367 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 RUNX2Q13950 521 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 LY6DQ14210 128 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 PCLAFQ15004 111 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SOWAHCQ53LP3 525 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 ZNF793Q6ZN11 406 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 FRMD7Q6ZUT3 714 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 EXOC3L1Q86VI1 746 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 ACOT4Q8N9L9 421 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 MTFMTQ96DP5 389 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SERPINI1Q99574 410 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 RBCK1Q9BYM8 510 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SLC29A3Q9BZD2 475 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SSU72Q9NP77 194 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SMG1Q96Q15 3661 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 PCSK5Q92824 1860 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 LOC102723996A0A087X1L8 192 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 OR2W5A6NFC9 320 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 MKRN2OSH3BPM6 223 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 RTCAO00442 366 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 TRIM13O60858 407 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 B4GALT2O60909 372 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 ESRRBO95718 433 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 ENO1P06733 434 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 MYZAPP0CAP1 466 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 CCL11P51671 97 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 RAP1GDS1P52306 607 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 RHAGQ02094 409 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 SGO1Q5FBB7 561 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 FAAH2Q6GMR7 532 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 OR4C11Q6IEV9 310 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 CDYL2Q8N8U2 506 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 PLPP5Q8NEB5 264 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 ADAMTS18Q8TE60 1221 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 SLC39A7Q92504 469 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 C8orf44Q96CB5 159 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 LYRM4Q9HD34 91 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 DAPP1Q9UN19 280 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 ACTL7BQ9Y614 415 aa18.7■□□□□ 0.58
PDLIM2-207ENST00000409417 FAM227AF5H4B4 570 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 PLPP1O14494 284 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 UBFD1O14562 309 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 PRMT3O60678 531 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 CEACAM4O75871 244 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 SEMA3DO95025 777 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 ETHE1O95571 254 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 KRT6AP02538 564 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 KRT6BP04259 564 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 SSR2P43308 183 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 KRT6CP48668 564 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 LIM2P55344 173 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 RAB38P57729 211 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 ASPHQ12797 758 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 AIMP2Q13155 320 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 RCN2Q14257 317 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 CASP8Q14790 479 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 ABRAXAS2Q15018 415 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 NSDHLQ15738 373 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 NDUFAF7Q7L592 441 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 METTL6Q8TCB7 284 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 AGAP11Q8TF27 550 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 SELENOMQ8WWX9 145 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 ZBTB9Q96C00 473 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 ABHD17AQ96GS6 310 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 STMN4Q9H169 189 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 MID1IP1Q9NPA3 183 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 ATP13A2Q9NQ11 1180 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 FARSBQ9NSD9 589 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 KCMF1Q9P0J7 381 aa18.69■□□□□ 0.58
PDLIM2-207ENST00000409417 H3BQF6 201 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 MANBAO00462 879 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 HPP00738 406 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 COX6A1P12074 109 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 ALDH3A1P30838 453 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 SOX8P57073 446 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 QSOX2Q6ZRP7 698 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 TRMOQ9BU70 441 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 GATA5Q9BWX5 397 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 SORBS1Q9BX66 1292 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 ZNF717Q9BY31 904 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 BRF2Q9HAW0 419 aa18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 C19orf25Q9UFG5 118 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 PCDHGA9Q9Y5G4 932 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-207ENST00000409417 CFAP46Q8IYW2 2715 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 IGHV1-45A0A0A0MS14 117 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 MASP2O00187 686 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms