RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 GPR149Q86SP6 731 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CCDC116Q8IYX3 515 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PARP8Q8N3A8 854 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CHST4Q8NCG5 386 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FATE1Q969F0 183 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 EBF4Q9BQW3 602 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CHID1Q9BWS9 393 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CSNK1G1Q9HCP0 422 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CENPMQ9NSP4 180 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 COMMD9Q9P000 198 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 COL5A3P25940 1745 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 C1orf226A1L170 272 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SOBPA7XYQ1 873 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RNF13O43567 381 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FDXRP22570 491 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 HLA-FP30511 346 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PDZD3Q86UT5 571 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SATL1Q86VE3 508 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PNLDC1Q8NA58 520 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 OR10G2Q8NGC3 310 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 OR5K1Q8NHB7 308 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 MAFAQ8NHW3 353 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PEX11GQ96HA9 241 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 LPAR4Q99677 370 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 DNAJB9Q9UBS3 223 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SRPK3Q9UPE1 567 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TMEM5Q9Y2B1 443 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RREB1Q92766 1687 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SVILO95425 2214 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PRSS38A1L453 326 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 BLOC1S5-TXNDC5H3BN57 136 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 DFNA5O60443 496 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GPR37L1O60883 481 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TSC22D2O75157 780 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 IL3P08700 152 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CD63P08962 238 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ANXA8P13928 327 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CDKN2DP55273 166 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SHC2P98077 582 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ST3GAL3Q11203 375 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RAET1LQ5VY80 246 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SLC2A7Q6PXP3 512 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PDPRQ8NCN5 879 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 WDR60Q8WVS4 1066 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PAIP1Q9H074 479 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SLC35C2Q9NQQ7 365 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ASB6Q9NWX5 421 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 A0A0J9YY10 115 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 HYKKA2RU49 373 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 YKT6O15498 198 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CDC40O60508 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FARS2O95363 451 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 IL1RNP18510 177 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ARSDP51689 593 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RAB25P57735 213 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CLRN1P58418 232 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PPP2R2BQ00005 443 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TRAP1Q12931 704 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RAB6CQ53S08 254 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GPR153Q6NV75 609 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RPS27LQ71UM5 84 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 LAPTM4BQ86VI4 370 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 OR10Q1Q8NGQ4 319 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 EDAQ92838 391 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 COX4I2Q96KJ9 171 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CD180Q99467 661 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ZFYVE21Q9BQ24 234 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PHF7Q9BWX1 381 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RAB6CQ9H0N0 254 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 UPB1Q9UBR1 384 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 IFT52Q9Y366 437 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 A0A1W2PQ72 361 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 POLR1CO15160 346 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 EMC8O43402 210 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ZBTB11O95625 1053 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 MTHFD1P11586 935 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 TIMP2P16035 220 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 HOXA9P31269 272 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 FOXN2P32314 431 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 RPS3AP61247 264 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PLP2Q04941 152 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DEFB110Q30KQ9 67 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SPANXN4Q5MJ08 99 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 LGI4Q8N135 537 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PJA1Q8NG27 643 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 CRB3Q9BUF7 120 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PDCD10Q9BUL8 212 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PELI2Q9HAT8 420 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 OBP2AQ9NY56 170 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 TBX21Q9UL17 535 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 CCL26Q9Y258 94 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PCDHGB1Q9Y5G3 927 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 USP3Q9Y6I4 520 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DNMT3AQ9Y6K1 912 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 LRP5O75197 1615 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DRGXA6NNA5 263 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 A8MVJ9 347 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 BHMG1C9JSJ3 638 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms