RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ACACAQ13085 2346 aa27.75■■■□□ 2.03
USP42-202ENST00000404008 TAF4O00268 1085 aa27.74■■■□□ 2.03
USP42-202ENST00000404008 YIPF2Q9BWQ6 316 aa27.74■■■□□ 2.03
USP42-202ENST00000404008 DDX31Q9H8H2 851 aaKnown RBP27.74■■■□□ 2.03
USP42-202ENST00000404008 PNPOQ9NVS9 261 aa27.74■■■□□ 2.03
USP42-202ENST00000404008 WDR70Q9NW82 654 aa27.74■■■□□ 2.03
USP42-202ENST00000404008 KCND3Q9UK17 655 aa27.74■■■□□ 2.03
USP42-202ENST00000404008 SSUH2Q9Y2M2 353 aa27.74■■■□□ 2.03
USP42-202ENST00000404008 VSTM2BA6NLU5 285 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 PIP5K1BO14986 540 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 RRP8O43159 456 aaKnown RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 CHST10O43529 356 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 CD63P08962 238 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 RPS15P62841 145 aaKnown RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 RUNX2Q13950 521 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 NKG7Q16617 165 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 IMPG1Q17R60 797 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 NUDT13Q86X67 352 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 DDIASQ8IXT1 998 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 CA13Q8N1Q1 262 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 ZCCHC7Q8N3Z6 543 aaKnown RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 TGIF2Q9GZN2 237 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 FARSAQ9Y285 508 aaKnown RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 ANKRD11Q6UB99 2663 aaPredicted RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 SLC28A1O00337 649 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 EEDO75530 441 aaKnown RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 KLF7O75840 302 aaPredicted RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 LINC00032P0C843 101 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 PTPN4P29074 926 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 OCA2Q04671 838 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 SRSF6Q13247 344 aaKnown RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 VWA2Q5GFL6 755 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 COMMD6Q7Z4G1 85 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 ZC3H7AQ8IWR0 971 aaKnown RBP27.73■■■□□ 2.03
USP42-202ENST00000404008 OR2T11Q8NH01 316 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 FAM76AQ8TAV0 307 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 STT3BQ8TCJ2 826 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 CHTF18Q8WVB6 975 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 DCBLD2Q96PD2 775 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 EFHD1Q9BUP0 239 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 IL17BQ9UHF5 180 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 ADAM29Q9UKF5 820 aa27.73■■■□□ 2.03
USP42-202ENST00000404008 A0A0A6YYD5 115 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 RGS14O43566 566 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 SKAP2O75563 359 aaPredicted RBP27.72■■■□□ 2.03
USP42-202ENST00000404008 RSL1D1O76021 490 aaKnown RBP27.72■■■□□ 2.03
USP42-202ENST00000404008 ZGLP1P0C6A0 271 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 XCR1P46094 333 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 RGS9BPQ6ZS82 235 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 Q6ZSR9 355 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 SPACA3Q8IXA5 215 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 C1orf52Q8N6N3 182 aaKnown RBP27.72■■■□□ 2.03
USP42-202ENST00000404008 APIPQ96GX9 242 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 PEX11GQ96HA9 241 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 C7orf26Q96N11 449 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 SPSB2Q99619 263 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 CCT7Q99832 543 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 ACTL8Q9H568 366 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 NXT1Q9UKK6 140 aaKnown RBP27.72■■■□□ 2.03
USP42-202ENST00000404008 TCFL5Q9UL49 500 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 DAPP1Q9UN19 280 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 PADI2Q9Y2J8 665 aa27.72■■■□□ 2.03
USP42-202ENST00000404008 NPIPB8E9PQR5 432 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 BMP10O95393 424 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 JUNP05412 331 aaKnown RBP27.71■■■□□ 2.03
USP42-202ENST00000404008 PRPH2P23942 346 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 LIM2P55344 173 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 FOXL2P58012 376 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 RPS18P62269 152 aaKnown RBP27.71■■■□□ 2.03
USP42-202ENST00000404008 SPIN4Q56A73 249 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 XKR7Q5GH72 579 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 SPDYAQ5MJ70 313 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 PAGE2Q7Z2X7 111 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 MIEF2Q96C03 454 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 LYRM4Q9HD34 91 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 SLCO1B3Q9NPD5 702 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 C14orf105Q9NVL8 296 aa27.71■■■□□ 2.03
USP42-202ENST00000404008 MRPS18BQ9Y676 258 aaKnown RBP27.71■■■□□ 2.03
USP42-202ENST00000404008 GBAP04062 536 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 RNH1P13489 461 aaKnown RBP27.7■■■□□ 2.02
USP42-202ENST00000404008 IL10P22301 178 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 TPP2P29144 1249 aaPredicted RBP27.7■■■□□ 2.02
USP42-202ENST00000404008 SLAMF1Q13291 335 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 PDCD2Q16342 344 aaPredicted RBP27.7■■■□□ 2.02
USP42-202ENST00000404008 FAM69BQ5VUD6 431 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 TMEM151BQ8IW70 566 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 OR2Y1Q8NGV0 311 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 C19orf60Q96EN9 201 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 C11orf24Q96F05 449 aaPredicted RBP27.7■■■□□ 2.02
USP42-202ENST00000404008 OR1F2PQ96R84 312 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 CCNL2Q96S94 520 aaPredicted RBP27.7■■■□□ 2.02
USP42-202ENST00000404008 SOX17Q9H6I2 414 aaPredicted RBP27.7■■■□□ 2.02
USP42-202ENST00000404008 KCMF1Q9P0J7 381 aa27.7■■■□□ 2.02
USP42-202ENST00000404008 PTRH2Q9Y3E5 179 aaKnown RBP27.7■■■□□ 2.02
USP42-202ENST00000404008 SCN2AQ99250 2005 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 TMPRSS11DO60235 418 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 KLK1P06870 262 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 BTKQ06187 659 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 ACSM2AQ08AH3 577 aa27.69■■■□□ 2.02
USP42-202ENST00000404008 ACSM2BQ68CK6 577 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms