RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 GOT1L1Q8NHS2 421 aaPredicted RBP19■□□□□ 0.63
CCDC47-202ENST00000403162 UTP15Q8TED0 518 aaKnown RBP19■□□□□ 0.63
CCDC47-202ENST00000403162 ATL1Q8WXF7 558 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 DUSP12Q9UNI6 340 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 CFL2Q9Y281 166 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 OBSL1O75147 1896 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 DOCK6Q96HP0 2047 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 TRAV19A0A0A6YYK7 116 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 A8MU76 341 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 ETHE1O95571 254 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 POU2F2P09086 479 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 GSTM1P09488 218 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 TNFRSF1BP20333 461 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 SPINT3P49223 89 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 RBBP4Q09028 425 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 TEAD2Q15562 447 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 SPIN4Q56A73 249 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 SLX4IPQ5VYV7 408 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 KLHDC8AQ8IYD2 350 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 B3GNT7Q8NFL0 401 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CXorf40BQ96DE9 158 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 ZNF486Q96H40 463 aaPredicted RBP18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CCDC32Q9BV29 185 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 YIPF2Q9BWQ6 316 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 SUV39H2Q9H5I1 410 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 DZANK1Q9NVP4 752 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 GPATCH2Q9NW75 528 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 MS4A12Q9NXJ0 267 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CNOT2Q9NZN8 540 aaKnown RBP18.99■□□□□ 0.63
CCDC47-202ENST00000403162 NPAP1Q9NZP6 1156 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CFAP20Q9Y6A4 193 aaKnown RBP18.99■□□□□ 0.63
CCDC47-202ENST00000403162 SH3D21A4FU49 640 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 EFCAB10A6NFE3 127 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 MGAT4DA6NG13 374 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 LINC01565O15544 149 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 OLFM2O95897 454 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 OPN1SWP03999 348 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CRATP43155 626 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CRISP3P54108 245 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 IFITM2Q01629 132 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 ARHGAP15Q53QZ3 475 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CCDC80Q76M96 950 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CYP4Z2PQ8N1L4 340 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 IL17RDQ8NFM7 739 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 OR52J3Q8NH60 311 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 BHLHE41Q9C0J9 482 aaPredicted RBP18.99■□□□□ 0.63
CCDC47-202ENST00000403162 NUAK2Q9H093 628 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 MIR1-1HGQ9H1L0 117 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 TTYH1Q9H313 450 aaPredicted RBP18.99■□□□□ 0.63
CCDC47-202ENST00000403162 BRD9Q9H8M2 597 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 ZNF556Q9HAH1 456 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 SGK2Q9HBY8 427 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 EHD3Q9NZN3 535 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 ENOPH1Q9UHY7 261 aa18.99■□□□□ 0.63
CCDC47-202ENST00000403162 CAB39Q9Y376 341 aaPredicted RBP18.99■□□□□ 0.63
CCDC47-202ENST00000403162 PRAMEF25A6NGN4 478 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 PSMD11O00231 422 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 KIAA0513O60268 411 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 MOSPD3O75425 235 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 APOA1P02647 267 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 ETFAP13804 333 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 LIMS1P48059 325 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 FCHO2Q0JRZ9 810 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 COX20Q5RI15 118 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.98■□□□□ 0.63
CCDC47-202ENST00000403162 ELMO1Q92556 727 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 SLC46A2Q9BY10 475 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 FBXL12Q9NXK8 326 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 ATP6V1HQ9UI12 483 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 CLEC4EQ9ULY5 219 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 FAM47E-STBD1D6RA91 191 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 RGS13O14921 159 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 SLCO2B1O94956 709 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 HSMCR30P0CW71 290 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 SRCP12931 536 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 POLR2EP19388 210 aaKnown RBP18.98■□□□□ 0.63
CCDC47-202ENST00000403162 MAGP20916 626 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 TIA1P31483 386 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCDC47-202ENST00000403162 RCVRNP35243 200 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 OR1E2P47887 323 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 GRIN2CQ14957 1233 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 GCNT6Q5T4J0 391 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 AGAP6Q5VW22 663 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 ATCAYQ86WG3 371 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 OR9Q2Q8NGE9 314 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 ASZ1Q8WWH4 475 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 AGAP4Q96P64 663 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 SDHCQ99643 169 aaPredicted RBP18.98■□□□□ 0.63
CCDC47-202ENST00000403162 TMEM38AQ9H6F2 299 aa18.98■□□□□ 0.63
CCDC47-202ENST00000403162 A0A075B6Q4 140 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 ARHGEF33A8MVX0 844 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 ZNF197O14709 1029 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 MPZL2O60487 215 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 PSIP1O75475 530 aaKnown RBP18.97■□□□□ 0.63
CCDC47-202ENST00000403162 DNTTP04053 509 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 CD70P32970 193 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 HMGA2P52926 109 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 CDC42P60953 191 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 CYP4F2P78329 520 aa18.97■□□□□ 0.63
CCDC47-202ENST00000403162 SCARB2Q14108 478 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms