RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 METTL2BQ6P1Q9 378 aaKnown RBP12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 CCDC80Q76M96 950 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 GDPD3Q7L5L3 318 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 NRARPQ7Z6K4 114 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 RAB43Q86YS6 212 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 TRIM48Q8IWZ4 208 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 DIRAS2Q96HU8 199 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 ANKHQ9HCJ1 492 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 SEMA3GQ9NS98 782 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 MKLN1Q9UL63 735 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 PRAMEF33A0A0G2JMD5 474 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 PRAMEF10O60809 474 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 ARHGEF15O94989 841 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 PTTG1O95997 202 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 PIK3CBP42338 1070 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 TGM4P49221 684 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 KCNC4Q03721 635 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 CNTN1Q12860 1018 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF385BQ569K4 471 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 PYDC2Q56P42 97 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 MSANTD1Q6ZTZ1 278 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 FAM124AQ86V42 546 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF486Q96H40 463 aaPredicted RBP12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 MAGEB10Q96LZ2 347 aaPredicted RBP12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 PIP5K1AQ99755 562 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 TTYH2Q9BSA4 534 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 SSR3Q9UNL2 185 aa12.92□□□□□ -0.34
RPGRIP1-202ENST00000400017 DICER1Q9UPY3 1922 aaKnown RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 KCNE1BA0A087WTH5 132 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 AOC2O75106 756 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 TBPL1P62380 186 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 SP3Q02447 781 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 MTAPQ13126 283 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 DCST1Q5T197 706 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 USP30Q70CQ3 517 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 RRM2BQ7LG56 351 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 MEX3DQ86XN8 651 aaKnown RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 IQCF1Q8N6M8 205 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 IL17FQ96PD4 163 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 POLR2J3Q9H1A7 115 aaKnown RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 NMNAT1Q9HAN9 279 aaPredicted RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ASF1AQ9Y294 204 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 CFAP20Q9Y6A4 193 aaKnown RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 MYO10Q9HD67 2058 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 DSCR3O14972 297 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 GRM6O15303 877 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 SLC28A2O43868 658 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ENTPD6O75354 484 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 LEFTY1O75610 366 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 CDRT1O95170 752 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 STATHP02808 62 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 IL3P08700 152 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 MPC1LP0DKB6 136 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 DSTNP60981 165 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 SP140Q13342 867 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 LRIT3Q3SXY7 679 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF517Q6ZMY9 492 aaPredicted RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 MMP21Q8N119 569 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF740Q8NDX6 193 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 PIK3R3Q92569 461 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ALG14Q96F25 216 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 CRELD1Q96HD1 420 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 OR2AG1Q9H205 316 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 QPCTLQ9NXS2 382 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF226Q9NYT6 803 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 SEC14L3Q9UDX4 400 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ENOPH1Q9UHY7 261 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 SLC13A4Q9UKG4 626 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ITM2BQ9Y287 266 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 DNMT3AQ9Y6K1 912 aaPredicted RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 TLX2O43763 284 aaPredicted RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 LZTS3O60299 673 aaPredicted RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 GASTP01350 101 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 FHP07954 510 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 TNFSF8P32971 234 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 CRISP1P54107 249 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 PTPN5P54829 565 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF544Q6NX49 715 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 OXR1Q8N573 874 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 DENND6BQ8NEG7 585 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 GPR151Q8TDV0 419 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 TMEM175Q9BSA9 504 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 GULP1Q9UBP9 304 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 CLEC2DQ9UHP7 191 aa12.91□□□□□ -0.34
RPGRIP1-202ENST00000400017 ANKRD36A6QL64 1941 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 SCN2BO60939 215 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 PTGER1P34995 402 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 RAET1GQ6H3X3 334 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 TUBA3EQ6PEY2 450 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 ENKURQ8TC29 256 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 MMP28Q9H239 520 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms