RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 WDR70Q9NW82 654 aa16.69■□□□□ 0.26
CTNS-203ENST00000399306 MS4A12Q9NXJ0 267 aa16.69■□□□□ 0.26
CTNS-203ENST00000399306 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.69■□□□□ 0.26
CTNS-203ENST00000399306 KMT2BQ9UMN6 2715 aaPredicted RBP16.68■□□□□ 0.26
CTNS-203ENST00000399306 AZIN1O14977 448 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 NKX2-8O15522 239 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 SSR2P43308 183 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 WDR4P57081 412 aaKnown RBP16.68■□□□□ 0.26
CTNS-203ENST00000399306 RAB38P57729 211 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 CXADRP78310 365 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 IL10RAQ13651 578 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 TTMPQ5BVD1 217 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 VWA2Q5GFL6 755 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 ARL13AQ5H913 290 aaPredicted RBP16.68■□□□□ 0.26
CTNS-203ENST00000399306 TRIM46Q7Z4K8 759 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 CLYBLQ8N0X4 340 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 METTL4Q8N3J2 472 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 PLPP5Q8NEB5 264 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 CCT7Q99832 543 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 YIPF2Q9BWQ6 316 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 ZNF717Q9BY31 904 aaPredicted RBP16.68■□□□□ 0.26
CTNS-203ENST00000399306 ACSS2Q9NR19 701 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 LYARQ9NX58 379 aaKnown RBP16.68■□□□□ 0.26
CTNS-203ENST00000399306 SIRT5Q9NXA8 310 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 HCN3Q9P1Z3 774 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 VPS29Q9UBQ0 182 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 C3orf18Q9UK00 162 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 DAPP1Q9UN19 280 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 MRPS33Q9Y291 106 aaKnown RBP16.68■□□□□ 0.26
CTNS-203ENST00000399306 MMACHCQ9Y4U1 282 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 SPACA6W5XKT8 324 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 CACNA1GO43497 2377 aa16.68■□□□□ 0.26
CTNS-203ENST00000399306 IDSB3KWA1 339 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 PSMD12O00232 456 aaPredicted RBP16.67■□□□□ 0.26
CTNS-203ENST00000399306 CRCPO75575 148 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 ETHE1O95571 254 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 CHEK2O96017 543 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 FHP07954 510 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 BSGP35613 385 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 EMP2P54851 167 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 MAT1AQ00266 395 aaKnown RBP16.67■□□□□ 0.26
CTNS-203ENST00000399306 RHDQ02161 417 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 RUNX2Q13950 521 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 ERV3-1Q14264 604 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 SYT16Q17RD7 645 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 TMEM205Q6UW68 189 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 ZNF793Q6ZN11 406 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 QSOX2Q6ZRP7 698 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 NUDT13Q86X67 352 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 APLFQ8IW19 511 aaPredicted RBP16.67■□□□□ 0.26
CTNS-203ENST00000399306 ZNF595Q8IYB9 648 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 OR5T3Q8NGG3 340 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 PRM3Q9NNZ6 103 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 PRDM9Q9NQV7 894 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 LANCL2Q9NS86 450 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 FARSBQ9NSD9 589 aaKnown RBP16.67■□□□□ 0.26
CTNS-203ENST00000399306 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 KCMF1Q9P0J7 381 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 PHF11Q9UIL8 331 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 HAO1Q9UJM8 370 aa16.67■□□□□ 0.26
CTNS-203ENST00000399306 LOC102723996A0A087X1L8 192 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 ZNF860A6NHJ4 632 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 HEXBP07686 556 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 NEFHP12036 1026 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 PRPH2P23942 346 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 GSTM5P46439 218 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 LIM2P55344 173 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 ABCE1P61221 599 aaKnown RBP16.66■□□□□ 0.26
CTNS-203ENST00000399306 TBL3Q12788 808 aaKnown RBP16.66■□□□□ 0.26
CTNS-203ENST00000399306 BIKQ13323 160 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 CHI3L2Q15782 390 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 COL28A1Q2UY09 1125 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 SPIN4Q56A73 249 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 KANK2Q63ZY3 851 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 MRM1Q6IN84 353 aaKnown RBP16.66■□□□□ 0.26
CTNS-203ENST00000399306 ZCCHC23Q6ZST2 131 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 PPP1R32Q7Z5V6 425 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 RNF175Q8N4F7 328 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 TMEM102Q8N9M5 508 aaPredicted RBP16.66■□□□□ 0.26
CTNS-203ENST00000399306 FAM76AQ8TAV0 307 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 MTFMTQ96DP5 389 aaKnown RBP16.66■□□□□ 0.26
CTNS-203ENST00000399306 PEX11GQ96HA9 241 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 FER1L6-AS2Q96M78 137 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 VN1R1Q9GZP7 353 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 SOX17Q9H6I2 414 aaPredicted RBP16.66■□□□□ 0.26
CTNS-203ENST00000399306 PFDN4Q9NQP4 134 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 C19orf25Q9UFG5 118 aaPredicted RBP16.66■□□□□ 0.26
CTNS-203ENST00000399306 MKL2Q9ULH7 1088 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 SLC12A4Q9UP95 1085 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 TRAF6Q9Y4K3 522 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 TIMM22Q9Y584 194 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 MGAQ8IWI9 3026 aa16.66■□□□□ 0.26
CTNS-203ENST00000399306 LOC400499M0QZD8 3231 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 A0A0A6YYD5 115 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 CDC14CA4D256 554 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 PEX12O00623 359 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 CLDN4O14493 209 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 KLF11O14901 512 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 B3GALT4O96024 378 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms