RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 SPHK2Q9NRA0 654 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 SACM1LQ9NTJ5 587 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 CCDC59Q9P031 241 aaKnown RBP12.54□□□□□ -0.4
PRAME-201ENST00000398741 RAB23Q9ULC3 237 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 A0A1W2PRB8 838 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 TSPAN11A1L157 253 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 CARNS1A5YM72 827 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 PRAMEF25A6NGN4 478 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 PCDH17O14917 1159 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 LILRB3O75022 631 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 DLGAP3O95886 979 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 KLK1P06870 262 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 CTSLP07711 333 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 NPPBP16860 134 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 GABRB1P18505 474 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 PPM1AP35813 382 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 CCR2P41597 374 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 XCR1P46094 333 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 RGS6P49758 472 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 CDC20Q12834 499 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 PDE7AQ13946 482 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 TMEM215Q68D42 235 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 ZNF367Q7RTV3 350 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 NLRP8Q86W28 1048 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 AQP11Q8NBQ7 271 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 KREMEN2Q8NCW0 462 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 B3GNT7Q8NFL0 401 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 C9orf43Q8TAL5 461 aaPredicted RBP12.54□□□□□ -0.4
PRAME-201ENST00000398741 MAPKAP1Q9BPZ7 522 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 TMEM121BQ9BXQ6 578 aaPredicted RBP12.54□□□□□ -0.4
PRAME-201ENST00000398741 ROGDIQ9GZN7 287 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 MTG2Q9H4K7 406 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 MIEF1Q9NQG6 463 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 ANKMY1Q9P2S6 941 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 SH2B3Q9UQQ2 575 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 COL4A6Q14031 1691 aa12.54□□□□□ -0.4
PRAME-201ENST00000398741 PRAMEF33A0A0G2JMD5 474 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 TRBC2A0A5B9 178 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 EFCAB10A6NFE3 127 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 DSCR3O14972 297 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 PRAMEF10O60809 474 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 MED26O95402 600 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 ARAFP10398 606 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 GRK5P34947 590 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 DEFB103AP81534 67 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 MEF2AQ02078 507 aaPredicted RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 ZNF45Q02386 682 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 IER5LQ5T953 404 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 FAM71E1Q6IPT2 247 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 PNCKQ6P2M8 343 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 LIPIQ6XZB0 460 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 TRAPPC5Q8IUR0 188 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 LMNTD1Q8N9Z9 388 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 FBXO15Q8NCQ5 510 aaPredicted RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 SLC5A11Q8WWX8 675 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 ARMC5Q96C12 935 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 MTERF3Q96E29 417 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 WRAP53Q9BUR4 548 aaKnown RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 ZBP1Q9H171 429 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 HCFC1R1Q9NWW0 138 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 IFT52Q9Y366 437 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 PCDHGA3Q9Y5H0 932 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 ENPP4Q9Y6X5 453 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 NUP214P35658 2090 aaPredicted RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 MPZL2O60487 215 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 IFNW1P05000 195 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 RHCEP18577 417 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 SOX6P35712 828 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 MMP12P39900 470 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 DSTNP60981 165 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 GRIN2CQ14957 1233 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 MED22Q15528 200 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 MPEG1Q2M385 716 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 STEAP3Q658P3 488 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 PTCHD4Q6ZW05 846 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 ANKRD33Q7Z3H0 272 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 TRMT11Q7Z4G4 463 aaKnown RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 SLC30A8Q8IWU4 369 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 WDR34Q96EX3 536 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 CDADC1Q9BWV3 514 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 NXF2Q9GZY0 626 aaKnown RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 RNF167Q9H6Y7 350 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 RC3H2Q9HBD1 1191 aaKnown RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 ITM2CQ9NQX7 267 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 GULP1Q9UBP9 304 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 UGT2A1Q9Y4X1 527 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 SNX8Q9Y5X2 465 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 PEX16Q9Y5Y5 336 aa12.53□□□□□ -0.4
PRAME-201ENST00000398741 GPC6Q9Y625 555 aaPredicted RBP12.53□□□□□ -0.4
PRAME-201ENST00000398741 SH3D21A4FU49 640 aa12.52□□□□□ -0.41
PRAME-201ENST00000398741 C5orf58C9J3I9 102 aa12.52□□□□□ -0.41
PRAME-201ENST00000398741 IL3P08700 152 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms