RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PAPOLGQ9BWT3 736 aaKnown RBP2.35□□□□□ -2.03
CD47-203ENST00000398258 NYXQ9GZU5 481 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 KCNMB3Q9NPA1 279 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 ANO10Q9NW15 660 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 POLKQ9UBT6 870 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 PILRAQ9UKJ1 303 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 TSPAN16Q9UKR8 245 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 ERVK-19Q9WJR5 959 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 EXOC6BQ9Y2D4 811 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 COLEC10Q9Y6Z7 277 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 RNF123Q5XPI4 1314 aa2.35□□□□□ -2.03
CD47-203ENST00000398258 hCG_38984A0A1B0GV85 526 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 MPTX1A8MV57 137 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 NPIPB9F8W1W9 429 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 SLC28A1O00337 649 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 ECE2O60344 883 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 SEC22BO75396 215 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 CPNE6O95741 557 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 EPOP01588 193 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 SERPINF2P08697 491 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 SBK2P0C263 348 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 CT45A8P0DMV1 189 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 CT45A9P0DMV2 189 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 PRKAR1AP10644 381 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 P4HA1P13674 534 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 C4BPBP20851 252 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 ACKR3P25106 362 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 FEN1P39748 380 aaKnown RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 XGP55808 180 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 GSCP56915 257 aaPredicted RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 CYCSP99999 105 aaKnown RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 MAPK11Q15759 364 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 C14orf177Q52M58 125 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 CT45A2Q5DJT8 189 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 ETFRF1Q6IPR1 90 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 NEK5Q6P3R8 708 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 Q6ZSR9 355 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 Q6ZVQ6 151 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 C1orf186Q6ZWK4 172 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 PTAR1Q7Z6K3 402 aaPredicted RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 MYPOPQ86VE0 399 aaPredicted RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 KRTAP7-1Q8IUC3 87 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 PEX5LQ8IYB4 626 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 RAB42Q8N4Z0 105 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 TCEANCQ8N8B7 351 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 ARL10Q8N8L6 244 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 MRPL43Q8N983 215 aaKnown RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 ZNF248Q8NDW4 579 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 TRPV3Q8NET8 790 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 URGCPQ8TCY9 931 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 ARHGAP45Q92619 1136 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 C11orf52Q96A22 123 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 TMEM186Q96B77 213 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 NECTIN4Q96NY8 510 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 NAP1L3Q99457 506 aaPredicted RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 FAM213AQ9BRX8 229 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 WDR13Q9H1Z4 485 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 DPEP2Q9H4A9 486 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 THAP9Q9H5L6 903 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 FGF22Q9HCT0 170 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 PIGVQ9NUD9 493 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 INTS10Q9NVR2 710 aaKnown RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 BARHL2Q9NY43 387 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 PSORS1C1Q9UIG5 152 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 MOSPD1Q9UJG1 213 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 POMT2Q9UKY4 750 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 NCKAP1Q9Y2A7 1128 aa2.34□□□□□ -2.03
CD47-203ENST00000398258 TDRKHQ9Y2W6 561 aaKnown RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 MRPS2Q9Y399 296 aaKnown RBP2.34□□□□□ -2.03
CD47-203ENST00000398258 FGD5Q6ZNL6 1462 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 IGHV3-20A0A0C4DH32 117 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 A0A1B0GU03 582 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 TLR4O00206 839 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CHUKO15111 745 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 MAGEB2O15479 319 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 LRCH4O75427 683 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CSDE1O75534 798 aaKnown RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 NXPH4O95158 308 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ANGPTL1O95841 491 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CXCL10P02778 98 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SKILP12757 684 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 AHCYP23526 432 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ACP1P24666 158 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CTNNA2P26232 953 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ATP6V1E1P36543 226 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SLC1A3P43003 542 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 TSFMP43897 325 aaKnown RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 CNN1P51911 297 aaKnown RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 SMSP52788 366 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CASP9P55211 416 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 HSPA14Q0VDF9 509 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 LCP2Q13094 533 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 RIGQ13278 110 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 HNRNPDQ14103 355 aaKnown RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 GAMTQ14353 236 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 MTF1Q14872 753 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SPHARQ15513 63 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 HLA-BQ31612 363 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 LRRC37A5PQ49AS3 106 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 EPC2Q52LR7 807 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms