RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 SLC37A3Q8NCC5 494 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC9A6Q92581 669 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 HRASLS5Q96KN8 279 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PTPN18Q99952 460 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RIOK2Q9BVS4 552 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 C1QTNF3Q9BXJ4 246 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 REEP4Q9H6H4 257 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MAN2B2Q9Y2E5 1009 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GABRR3A8MPY1 467 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SCAMP2O15127 329 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GJA1P17302 382 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NTSP30990 170 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RACK1P63244 317 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ARF5P84085 180 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 E2F2Q14209 437 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 IHHQ14623 411 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TRIM46Q7Z4K8 759 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 DNAJB7Q7Z6W7 309 aaPredicted RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LACC1Q8IV20 430 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CMTM8Q8IZV2 173 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GPR26Q8NDV2 337 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TBX5Q99593 518 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 EPYCQ99645 322 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PSD2Q9BQI7 771 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NDRG4Q9ULP0 352 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PPT2Q9UMR5 302 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 Q9Y3F1 56 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PCDHGA6Q9Y5G7 932 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ANKRD34BA5PLL1 514 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ARHGAP33O14559 1287 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SEPT4O43236 478 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 OR2B3O76000 313 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CLTBP09497 229 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SPNP16150 400 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RPS3P23396 243 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CCR7P32248 378 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 FADDQ13158 208 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GINS1Q14691 196 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LEXMQ3ZCV2 418 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 AMIGO1Q86WK6 493 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GALNT13Q8IUC8 556 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 IQCF1Q8N6M8 205 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 HUS1BQ8NHY5 278 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TESCQ96BS2 214 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TIFAQ96CG3 184 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 QRFPRQ96P65 431 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RANGRFQ9HD47 186 aaPredicted RBP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZNF224Q9NZL3 707 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 WWP2O00308 870 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC10A3P09131 477 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 JUNDP17535 347 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TIA1P31483 386 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SSR2P43308 183 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MAP2K3P46734 347 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SGSHP51688 502 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 KCNC4Q03721 635 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 KLHL22Q53GT1 634 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LIPJQ5W064 366 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PLAG1Q6DJT9 500 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 C17orf64Q86WR6 236 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 Q8N402 240 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LRRC20Q8TCA0 184 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZFP3Q96NJ6 502 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TRIB3Q96RU7 358 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 P2RY13Q9BPV8 354 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NIPSNAP1Q9BPW8 284 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SPATA5L1Q9BVQ7 753 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 KATNBL1Q9H079 304 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NMNAT1Q9HAN9 279 aaPredicted RBP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ENTPD4Q9Y227 616 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NRXN2Q9P2S2 1712 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 C12orf71A8MTZ7 269 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 KLK8O60259 260 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ENTPD6O75354 484 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CELP19835 753 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PTNP21246 168 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 DGKGP49619 791 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TIAL1Q01085 375 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MC1RQ01726 317 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MAB21L1Q13394 359 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PRSS36Q5K4E3 855 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 REEP3Q6NUK4 255 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LHFPL3Q86UP9 236 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NOXA1Q86UR1 476 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LAX1Q8IWV1 398 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MSRB3Q8IXL7 192 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC43A3Q8NBI5 491 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 JPH3Q8WXH2 748 aaPredicted RBP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC12A9Q9BXP2 914 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZNF717Q9BY31 904 aaPredicted RBP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ALOXE3Q9BYJ1 711 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZCCHC3Q9NUD5 404 aaKnown RBP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GOLGB1Q14789 3259 aaKnown RBP10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 FER1L6Q2WGJ9 1857 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 AP3D1O14617 1153 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PGRMC2O15173 223 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SEMA3DO95025 777 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PCMT1P22061 227 aa10.67□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CSRP3P50461 194 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms