RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 STARD5Q9NSY2 213 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 TMEM45AQ9NWC5 275 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 MRPS2Q9Y399 296 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 A0A087WV48 116 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 A0A0A6YYD5 115 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 GNG14A0A1W2PPG7 69 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 TXNDC9O14530 226 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 TMPRSS11DO60235 418 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 SCELO95171 688 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 B3GALT4O96024 378 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 FOLR1P15328 257 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 HIST1H1TP22492 207 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 ATP5A1P25705 553 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 TGM3Q08188 693 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 GPR19Q15760 415 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 SPRED3Q2MJR0 410 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 TMTC4Q5T4D3 741 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 RIMKLAQ8IXN7 391 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 POU5F2Q8N7G0 328 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 ZCCHC10Q8TBK6 192 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 C16orf78Q8WTQ4 265 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 NLNQ9BYT8 704 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 DPY30Q9C005 99 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 NRSN2Q9GZP1 204 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 SLC52A3Q9NQ40 469 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 TAGLN3Q9UI15 199 aa16.07■□□□□ 0.16
TSPAN4-205ENST00000397406 FITM1A5D6W6 292 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 ERICH4A6NGS2 130 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 C9JVG2 144 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 COX4I1P13073 169 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 ASMTP46597 345 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 PDX1P52945 283 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 C21orf58P58505 322 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 E2F1Q01094 437 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 ZFP36L1Q07352 338 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 TCTE1Q5JU00 501 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 CCNYL2Q5T2Q4 361 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 MRM1Q6IN84 353 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 BLOC1S3Q6QNY0 202 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 CCDC121Q6ZUS5 278 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 ABHD13Q7L211 337 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 YTHDF3Q7Z739 585 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 SNX32Q86XE0 403 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 ZCCHC7Q8N3Z6 543 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 KRTCAP2Q8N6L1 136 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 RCBTB1Q8NDN9 531 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 OR8K5Q8NH50 307 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 RP9Q8TA86 221 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 NUDT8Q8WV74 236 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 NSL1Q96IY1 281 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 CLMPQ9H6B4 373 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 MYNNQ9NPC7 610 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 SLC22A7Q9Y694 548 aa16.06■□□□□ 0.16
TSPAN4-205ENST00000397406 ACACAQ13085 2346 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 LOC100653049A0A140TA62 436 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 FAM234BA2RU67 622 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 PMS2P1A4D2B8 440 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 TMEM150CB9EJG8 249 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 BRINP1O60477 761 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 PRMT3O60678 531 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 KRT34O76011 436 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 MED26O95402 600 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 ALOX12P18054 663 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 PRPS1L1P21108 318 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 ITPKBP27987 946 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 POLR2JP52435 117 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 BTN3A2P78410 334 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 TRA2AQ13595 282 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 RCAN2Q14206 197 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 MAPRE2Q15555 327 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 LACTB2Q53H82 288 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 FAM71E1Q6IPT2 247 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 PRSS41Q7RTY9 318 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 B3GNT8Q7Z7M8 397 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 ACOT4Q8N9L9 421 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 N4BP2L2Q92802 583 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 ZNF501Q96CX3 271 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 NXPE2Q96DL1 559 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 CMTM5Q96DZ9 223 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 C10orf90Q96M02 699 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 TUBB6Q9BUF5 446 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 SPRTNQ9H040 489 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 SIDT1Q9NXL6 827 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 EXO1Q9UQ84 846 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 FAM208BQ5VWN6 2430 aa16.05■□□□□ 0.16
TSPAN4-205ENST00000397406 CROCCQ5TZA2 2017 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 ARHGAP10A1A4S6 786 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 NR5A2O00482 541 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 LRATO95237 230 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 SNRPB2P08579 225 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 CAPN3P20807 821 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 CALB2P22676 271 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 CERS1P27544 350 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 GSTM5P46439 218 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 GCGRP47871 477 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 MAPK12P53778 367 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 CLNS1AP54105 237 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 EMP3P54852 163 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 TAS2R50P59544 299 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 TRA2BP62995 288 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms