RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SMIM10Q96HG1 83 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 LMF1Q96S06 567 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 TUBB6Q9BUF5 446 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 MFRPQ9BY79 579 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 EPS8L2Q9H6S3 715 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 MANSC1Q9H8J5 431 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 OPTCQ9UBM4 332 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 B3GNT3Q9Y2A9 372 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 A0A088AWK7 358 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 ZNF860A6NHJ4 632 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 K7EPI3 171 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 UBXN8O00124 270 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 CHST10O43529 356 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 EDF1O60869 148 aaKnown RBP13.73□□□□□ -0.21
SEC13-208ENST00000397109 PRR35P0CG20 571 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 ZNF10P21506 573 aaPredicted RBP13.73□□□□□ -0.21
SEC13-208ENST00000397109 JAK1P23458 1154 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 HNF4AP41235 474 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 CASP2P42575 452 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 MLLT10P55197 1068 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 RAB8AP61006 207 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 PCDH1Q08174 1060 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 Q0VFX4 171 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 HYAL2Q12891 473 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 DOC2AQ14183 400 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 PCOLCEQ15113 449 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 CCDC153Q494R4 210 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 TECRLQ5HYJ1 363 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 IGFL2Q6UWQ7 119 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 ISLR2Q6UXK2 745 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 CPEB2Q7Z5Q1 589 aaKnown RBP13.73□□□□□ -0.21
SEC13-208ENST00000397109 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 CCT6BQ92526 530 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 UBE2E3Q969T4 207 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 GAL3ST3Q96A11 431 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 FAR2Q96K12 515 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 ELAC2Q9BQ52 826 aaKnown RBP13.73□□□□□ -0.21
SEC13-208ENST00000397109 MESP1Q9BRJ9 268 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 ARL2BPQ9Y2Y0 163 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 SCN2AQ99250 2005 aa13.73□□□□□ -0.21
SEC13-208ENST00000397109 GOLGA8RI6L899 631 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 PSMD12O00232 456 aaPredicted RBP13.72□□□□□ -0.21
SEC13-208ENST00000397109 WFS1O76024 890 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 FHP07954 510 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 RBP1P09455 135 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 RNH1P13489 461 aaKnown RBP13.72□□□□□ -0.21
SEC13-208ENST00000397109 MTHFD2P13995 350 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 GFAPP14136 432 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 SERPINB4P48594 390 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 CHIT1Q13231 466 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 CRB2Q5IJ48 1285 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 SPATA21Q7Z572 469 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 ATCAYQ86WG3 371 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 TMEM151AQ8N4L1 468 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 OR5T3Q8NGG3 340 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 CPT1CQ8TCG5 803 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 PPP4R1Q8TF05 950 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 MIB2Q96AX9 1013 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 IMMP1LQ96LU5 166 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 MRPL57Q9BQC6 102 aaKnown RBP13.72□□□□□ -0.21
SEC13-208ENST00000397109 NPLQ9BXD5 320 aaPredicted RBP13.72□□□□□ -0.21
SEC13-208ENST00000397109 RHBGQ9H310 441 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 KLHL31Q9H511 634 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 RABEP2Q9H5N1 569 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 LANCL2Q9NS86 450 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 FGFR1OP2Q9NVK5 253 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 ZNF358Q9NW07 568 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 KLHL14Q9P2G3 628 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 MID2Q9UJV3 735 aa13.72□□□□□ -0.21
SEC13-208ENST00000397109 TNPO3Q9Y5L0 923 aaKnown RBP13.72□□□□□ -0.21
SEC13-208ENST00000397109 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 MAGEB17A8MXT2 336 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 PRAMEF4O60810 478 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 EPB42P16452 691 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 EPORP19235 508 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 GLRBP48167 497 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 CD97P48960 835 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 EFNA3P52797 238 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 ALDH18A1P54886 795 aaKnown RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 BTN3A2P78410 334 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 RHAGQ02094 409 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 ACTN3Q08043 901 aaPredicted RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 TGM3Q08188 693 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 MFAP5Q13361 173 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 E2F2Q14209 437 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 SETDB1Q15047 1291 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 NSDHLQ15738 373 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 IGFBP7Q16270 282 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 PLEKHN1Q494U1 663 aaPredicted RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 PRAMEF9Q5VWM5 478 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 METTL2BQ6P1Q9 378 aaKnown RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 Q6ZS92 163 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 ANKRD37Q7Z713 158 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 Q8NA96 180 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 MS4A6EQ96DS6 147 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 FAM111AQ96PZ2 611 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 WDR77Q9BQA1 342 aaPredicted RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms