RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 HSBP1L1C9JCN9 74 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 GRID2O43424 1007 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ASPAP45381 313 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 PRKXP51817 358 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 GIMAP5Q96F15 307 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 SAV1Q9H4B6 383 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 SUV39H2Q9H5I1 410 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 M0R2N6 131 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 DLSTP36957 453 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ARSFP54793 590 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 PDZD9Q8IXQ8 264 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 KLK6Q92876 244 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ACDQ96AP0 544 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 DERL2Q9GZP9 239 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 DHDHQ9UQ10 334 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 MYBPHLA2RUH7 354 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 SCAMP1O15126 338 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 AMY2BP19961 511 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ENTPD1P49961 510 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 RHBDL3P58872 404 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 EMX2Q04743 252 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 BRAT1Q6PJG6 821 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 TSPAN33Q86UF1 283 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 BIRC8Q96P09 236 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 METTL7AQ9H8H3 244 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 TMPRSS11EQ9UL52 423 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 LTN1O94822 1766 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 CXorf49A8MYA2 514 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 HTRA2O43464 458 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 CDK2P24941 298 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 DGKEP52429 567 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ACTA2P62736 377 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ACTG2P63267 376 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ZC3HC1Q86WB0 502 aaKnown RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 OR13C3Q8NGS6 347 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 FOLH1BQ9HBA9 442 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ASB6Q9NWX5 421 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 TEX264Q9Y6I9 313 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 FAM189A1O60320 539 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 LMO2P25791 158 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 CREB5Q02930 508 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 SLC35F1Q5T1Q4 408 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 YJEFN3A6XGL0 299 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 SCGB2A1O75556 95 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 TMEM63AO94886 807 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 MRPL3P09001 348 aaKnown RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 CD3GP09693 182 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ADH7P40394 386 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 FRKP42685 505 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 KCNJ11Q14654 390 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ZER1Q7Z7L7 766 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 OR2T33Q8NG76 320 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 MALSU1Q96EH3 234 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 MRM3Q9HC36 420 aaKnown RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 PAQR5Q9NXK6 330 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 SLC7A11Q9UPY5 501 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 A0A1W2PPW3 197 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 GPR25O00155 361 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 KCNJ13O60928 360 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 EDNRBP24530 442 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 ENPP7Q6UWV6 458 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 OR6N1Q8NGY5 312 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 CHPT1Q8WUD6 406 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 MOAP1Q96BY2 351 aa13.5□□□□□ -0.25
COL4A3-202ENST00000396578 WDR77Q9BQA1 342 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 CARS2Q9HA77 564 aaKnown RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 NUFIP1Q9UHK0 495 aaKnown RBP13.5□□□□□ -0.25
COL4A3-202ENST00000396578 MT-ND2P03891 347 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF35P13682 527 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ATP6AP1Q15904 470 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 C1orf94Q6P1W5 598 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 UGT2A3Q6UWM9 527 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF280BQ86YH2 543 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ACBD4Q8NC06 268 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 WFIKKN2Q8TEU8 576 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 AUTS2Q8WXX7 1259 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 LIN37Q96GY3 246 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CRTAC1Q9NQ79 661 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 WNT7AO00755 349 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ACP5P13686 325 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 KCNC4Q03721 635 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 BCL2A1Q16548 175 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 TREML2Q5T2D2 321 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 EGFL6Q8IUX8 553 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 AVL9Q8NBF6 648 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CDKN2AIPNLQ96HQ2 116 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 SSX3Q99909 188 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ICKQ9UPZ9 632 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 PCDHB11Q9Y5F2 797 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 TCRBV7S3A2A0A539 114 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 OR6C6A6NF89 314 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 HSD11B2P80365 405 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CLCA4Q14CN2 919 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms