RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 RIMKLAQ8IXN7 391 aa13□□□□□ -0.33
VAPB-202ENST00000395802 ARHGAP24Q8N264 748 aa13□□□□□ -0.33
VAPB-202ENST00000395802 OR8J2Q8NGG1 315 aa13□□□□□ -0.33
VAPB-202ENST00000395802 OR8K5Q8NH50 307 aa13□□□□□ -0.33
VAPB-202ENST00000395802 CLHC1Q8NHS4 586 aa13□□□□□ -0.33
VAPB-202ENST00000395802 PUM2Q8TB72 1066 aaKnown RBP eCLIP13□□□□□ -0.33
VAPB-202ENST00000395802 SMIM10Q96HG1 83 aa13□□□□□ -0.33
VAPB-202ENST00000395802 MACROD1Q9BQ69 325 aa13□□□□□ -0.33
VAPB-202ENST00000395802 MMADHCQ9H3L0 296 aaPredicted RBP13□□□□□ -0.33
VAPB-202ENST00000395802 WDR41Q9HAD4 459 aa13□□□□□ -0.33
VAPB-202ENST00000395802 PRDM9Q9NQV7 894 aa13□□□□□ -0.33
VAPB-202ENST00000395802 PHF11Q9UIL8 331 aa13□□□□□ -0.33
VAPB-202ENST00000395802 ATXN7L1Q9ULK2 861 aaPredicted RBP13□□□□□ -0.33
VAPB-202ENST00000395802 RP1P56715 2156 aa13□□□□□ -0.33
VAPB-202ENST00000395802 IGHV5-10-1A0A0J9YXX1 117 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 D6RAR5 112 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 RTCAO00442 366 aaKnown RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 AIM2O14862 343 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 SCAMP2O15127 329 aaKnown RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 EEDO75530 441 aaKnown RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 OR2B3O76000 313 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 FAM58BPP0C7Q3 252 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 DDCP20711 480 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 BUD31P41223 144 aaPredicted RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 NUDT2P50583 147 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ARSFP54793 590 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 KLC1Q07866 573 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 C2orf80Q0P641 193 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 MAPKAPK3Q16644 382 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 PRTGQ2VWP7 1150 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 DEFB110Q30KQ9 67 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 MCUR1Q96AQ8 359 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 MVB12AQ96EY5 273 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ZNF764Q96H86 408 aaPredicted RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 EGLN2Q96KS0 407 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 TEX37Q96LM6 180 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 FAM120CQ9NX05 1096 aaKnown RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 EHD3Q9NZN3 535 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 TMEM9Q9P0T7 183 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 PSME2Q9UL46 239 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 PCDHGA1Q9Y5H4 931 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ASXL3Q9C0F0 2248 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 C1orf226A1L170 272 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 HYKKA2RU49 373 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 TMEM150CB9EJG8 249 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 MRASO14807 208 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 P2RX6O15547 441 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 MGRN1O60291 552 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 LRATO95237 230 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 GBAP04062 536 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ITGAXP20702 1163 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 CSTF2P33240 577 aaKnown RBP eCLIP12.99□□□□□ -0.33
VAPB-202ENST00000395802 AVPR1BP47901 424 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 GABRA4P48169 554 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ITGA1P56199 1179 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 SLC25A3Q00325 362 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 DEFB134Q4QY38 66 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 TIGD2Q4W5G0 525 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 FBXW10Q5XX13 1052 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 FAM71E1Q6IPT2 247 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 HACD2Q6Y1H2 254 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ZNF574Q6ZN55 896 aaPredicted RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 KRTCAP2Q8N6L1 136 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 FAM13CQ8NE31 585 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ZCCHC10Q8TBK6 192 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ADAMTS18Q8TE60 1221 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 TEFMQ96QE5 360 aaKnown RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 OR52E6Q96RD3 313 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 HOPXQ9BPY8 73 aaPredicted RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 BHLHE41Q9C0J9 482 aaPredicted RBP12.99□□□□□ -0.33
VAPB-202ENST00000395802 LYRM4Q9HD34 91 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 LHX9Q9NQ69 397 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 FAM86C1Q9NVL1 165 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 ATP6V1HQ9UI12 483 aa12.99□□□□□ -0.33
VAPB-202ENST00000395802 A8MUI8 341 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 AKAP10O43572 662 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 GALR3O60755 368 aaPredicted RBP12.98□□□□□ -0.33
VAPB-202ENST00000395802 TBX19O60806 448 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 CBFA2T3O75081 653 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 RFPL3O75679 317 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 STATHP02808 62 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 IL3P08700 152 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 IL12AP29459 219 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 PGS1Q32NB8 556 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 SPANXN4Q5MJ08 99 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 REP15Q6BDI9 236 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 PRMT9Q6P2P2 845 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 RBM44Q6ZP01 1051 aaKnown RBP12.98□□□□□ -0.33
VAPB-202ENST00000395802 SAMD14Q8IZD0 417 aaPredicted RBP12.98□□□□□ -0.33
VAPB-202ENST00000395802 GFM2Q969S9 779 aaKnown RBP12.98□□□□□ -0.33
VAPB-202ENST00000395802 TM4SF18Q96CE8 201 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 RCN3Q96D15 328 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 ITCHQ96J02 903 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 CCDC74BQ96LY2 380 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 NDC1Q9BTX1 674 aa12.98□□□□□ -0.33
VAPB-202ENST00000395802 DUSP26Q9BV47 211 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms