RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 RBMS3Q6XE24 437 aaKnown RBP5.04□□□□□ -1.6
CDKN3-203ENST00000395577 CCDC60Q8IWA6 550 aaPredicted RBP5.04□□□□□ -1.6
CDKN3-203ENST00000395577 OR7A2PQ8NGA2 310 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 CDHR1Q96JP9 859 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 DOCK7Q96N67 2140 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 CDCA3Q99618 268 aaPredicted RBP5.04□□□□□ -1.6
CDKN3-203ENST00000395577 ACPTQ9BZG2 426 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 FAM49AQ9H0Q0 323 aaPredicted RBP5.04□□□□□ -1.6
CDKN3-203ENST00000395577 PPANQ9NQ55 473 aaKnown RBP5.04□□□□□ -1.6
CDKN3-203ENST00000395577 MRPL17Q9NRX2 175 aaKnown RBP5.04□□□□□ -1.6
CDKN3-203ENST00000395577 INTS9Q9NV88 658 aaKnown RBP5.04□□□□□ -1.6
CDKN3-203ENST00000395577 CYP39A1Q9NYL5 469 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 APPL1Q9UKG1 709 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 MAN1B1Q9UKM7 699 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 GRID1Q9ULK0 1009 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 AGTPBP1Q9UPW5 1226 aa5.04□□□□□ -1.6
CDKN3-203ENST00000395577 A0A087X0K7 114 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SYCE3A1L190 88 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 ANKDD1BA6NHY2 528 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 H3BMM5 538 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 RTCAO00442 366 aaKnown RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 EPHB6O15197 1021 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SCO2O43819 266 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 ACSL4O60488 711 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 GLRA3O75311 464 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 NGFP01138 241 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 ATP1B1P05026 303 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 EDN1P05305 212 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 GOT1P17174 413 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 CCKARP32238 428 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 CLDN17P56750 224 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 MYL7Q01449 175 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SLC34A1Q06495 639 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 RBM39Q14498 530 aaKnown RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 ACKR1Q16570 336 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 ZNF672Q499Z4 452 aaPredicted RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 XKR6Q5GH73 641 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 C19orf48Q6RUI8 117 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SIGLEC15Q6ZMC9 328 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SLC16A9Q7RTY1 509 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 CPEB2Q7Z5Q1 589 aaKnown RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 RABEPKQ7Z6M1 372 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 TRPT1Q86TN4 253 aaKnown RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 ASPGQ86U10 573 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SERPINA12Q8IW75 414 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 KIRREL3Q8IZU9 778 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 GBP7Q8N8V2 638 aaPredicted RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 OR4C15Q8NGM1 316 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 RNASE8Q8TDE3 154 aaKnown RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 EPSTI1Q96J88 318 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 TRIM7Q9C029 511 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 NAPBQ9H115 298 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 RPF1Q9H9Y2 349 aaKnown RBP5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SIX2Q9NPC8 291 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 MAD2L2Q9UI95 211 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 DUOX1Q9NRD9 1551 aa5.03□□□□□ -1.6
CDKN3-203ENST00000395577 SMCHD1A6NHR9 2005 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 RNF123Q5XPI4 1314 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 P2RY10O00398 339 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 BCAS2O75934 225 aaPredicted RBP5.02□□□□□ -1.61
CDKN3-203ENST00000395577 CDK2AP2O75956 126 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 ITGA3P26006 1051 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 EPHX2P34913 555 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 TNNT2P45379 298 aaPredicted RBP5.02□□□□□ -1.61
CDKN3-203ENST00000395577 DNA2P51530 1060 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 SMSP52788 366 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 ZNF718Q3SXZ3 478 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 AGAP6Q5VW22 663 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 ZNF790Q6PG37 636 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 CNSTQ6PJW8 725 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 SLC26A9Q7LBE3 791 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 TMEM126BQ8IUX1 230 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 TDHQ8IZJ6 230 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 SMYD1Q8NB12 490 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 CLEC1AQ8NC01 280 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 OR4C3Q8NH37 302 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 LRRC8CQ8TDW0 803 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 SAP25Q8TEE9 199 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 RFT1Q96AA3 541 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 EEF2KMTQ96G04 330 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 CFAP36Q96G28 342 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 SENP5Q96HI0 755 aaPredicted RBP5.02□□□□□ -1.61
CDKN3-203ENST00000395577 CAPNS2Q96L46 248 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 TMEM237Q96Q45 408 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 PRMT1Q99873 361 aaKnown RBP5.02□□□□□ -1.61
CDKN3-203ENST00000395577 TNMDQ9H2S6 317 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 C5orf66Q9H5L9 145 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 PANK3Q9H999 370 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 ZNF556Q9HAH1 456 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 ZNF334Q9HCZ1 680 aaPredicted RBP5.02□□□□□ -1.61
CDKN3-203ENST00000395577 FETUBQ9UGM5 382 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 IL36AQ9UHA7 158 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 ODF2LQ9ULJ1 636 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 ZNF510Q9Y2H8 683 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 TDRKHQ9Y2W6 561 aaKnown RBP5.02□□□□□ -1.61
CDKN3-203ENST00000395577 CEP290O15078 2479 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 LAMA3Q16787 3333 aa5.02□□□□□ -1.61
CDKN3-203ENST00000395577 MAGEB16A2A368 324 aa5.01□□□□□ -1.61
CDKN3-203ENST00000395577 GTPBP10A4D1E9 387 aaKnown RBP5.01□□□□□ -1.61
CDKN3-203ENST00000395577 FAM172BPA6NC97 362 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms