RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ENTHD1Q8IYW4 607 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 RDH12Q96NR8 316 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 VN1R3Q9BXE9 311 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 SERHL2Q9H4I8 314 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 SERHLQ9NQF3 203 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 IL17CQ9P0M4 197 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 CFL2Q9Y281 166 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 N6AMT1Q9Y5N5 214 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 RP1P56715 2156 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 E7EQ34 232 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 TAPBPO15533 448 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 FRS3O43559 492 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 GABARAPO95166 117 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 EBLN1P0CF75 366 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 C8orf89P0DMQ9 161 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 CBX2Q14781 532 aaPredicted RBP12.69□□□□□ -0.38
NFKB1-202ENST00000394820 ANGPT1Q15389 498 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 WSCD2Q2TBF2 565 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 IDNKQ5T6J7 187 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 PRSS48Q7RTY5 328 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 RIMKLAQ8IXN7 391 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 GPR150Q8NGU9 434 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 CYB5D2Q8WUJ1 264 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 TM9SF2Q99805 663 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 PRR14Q9BWN1 585 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 BRINP2Q9C0B6 783 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 KCNK12Q9HB15 430 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 SEC16AO15027 2179 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 SCN4AP35499 1836 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 ISM1B1AKI9 464 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 TLR4O00206 839 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 RFXAPO00287 272 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 EIF2S1P05198 315 aaKnown RBP12.69□□□□□ -0.38
NFKB1-202ENST00000394820 CELP19835 753 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 MYL9P24844 172 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 TALDO1P37837 337 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 NSG1P42857 185 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 LMAN2Q12907 356 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 DOC2AQ14183 400 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 AGAP7PQ5VUJ5 663 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 ATG9BQ674R7 924 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 CEACAM20Q6UY09 585 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF852Q6ZMS4 543 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 MMAAQ8IVH4 418 aaKnown RBP12.69□□□□□ -0.38
NFKB1-202ENST00000394820 ARSGQ96EG1 525 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 FCRL4Q96PJ5 515 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 BBS4Q96RK4 519 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 MAT2BQ9NZL9 334 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 FBXO10Q9UK96 956 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 SNX7Q9UNH6 387 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 I3L521 148 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 TEX28O15482 410 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLITRK5O94991 958 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 HPRP00739 348 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 RPS3P23396 243 aaKnown RBP eCLIP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 PSMD8P48556 350 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 RORCP51449 518 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLC35A2P78381 396 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 MAP4K2Q12851 820 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLAMF1Q13291 335 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 NDUFA5Q16718 116 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLC35F1Q5T1Q4 408 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 ATAD3CQ5T2N8 411 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 DHRS4L2Q6PKH6 230 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 TMEM220Q6QAJ8 160 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 RD3Q7Z3Z2 195 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 GPR149Q86SP6 731 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 ZSWIM9Q86XI8 627 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 VRK3Q8IV63 474 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 IPCEF1Q8WWN9 437 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 HCFC1R1Q9NWW0 138 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 LHX3Q9UBR4 397 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 PPT2Q9UMR5 302 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLC6A14Q9UN76 642 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SATB2Q9UPW6 733 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 YARS2Q9Y2Z4 477 aaKnown RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 INSL5Q9Y5Q6 135 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 PRAMEF33A0A0G2JMD5 474 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 A0A1W2PQL4 384 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 A0A1W2PRB8 838 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 CLCA1A8K7I4 914 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 TTC34A8MYJ7 566 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 GNB5O14775 395 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 NUPL2O15504 423 aaKnown RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SSNA1O43805 119 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 PRAMEF10O60809 474 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 KCNK2O95069 426 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLC2A2P11168 524 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 ATF4P18848 351 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 RGS6P49758 472 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 CLDN8P56748 225 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 RPL6Q02878 288 aaKnown RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF267Q14586 743 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-202ENST00000394820 SLC14A2Q15849 920 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 LRRC26Q2I0M4 334 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
NFKB1-202ENST00000394820 COX20Q5RI15 118 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms