RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 CLDN4O14493 209 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 UBFD1O14562 309 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 FFAR3O14843 346 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 AZIN1O14977 448 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 NKX2-8O15522 239 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 GPR42O15529 346 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CHST10O43529 356 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 RDH16O75452 317 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CRCPO75575 148 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CHEK2O96017 543 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 PDYNP01213 254 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 STATHP02808 62 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 SERPINE1P05121 402 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 FHP07954 510 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 NEFHP12036 1026 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 WT1P19544 449 aaPredicted RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 HIST1H1TP22492 207 aaPredicted RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 MMP11P24347 488 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ATP5A1P25705 553 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 XCR1P46094 333 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 NEK2P51955 445 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 RAP1GDS1P52306 607 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 EMP2P54851 167 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 RRADP55042 308 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 RPS13P62277 151 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CXADRP78310 365 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 RHDQ02161 417 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 KLC1Q07866 573 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CDC20Q12834 499 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CSTF3Q12996 717 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 SRSF6Q13247 344 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 BIKQ13323 160 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 DDX39BQ13838 428 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 MPP2Q14168 576 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ERV3-1Q14264 604 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 VWA2Q5GFL6 755 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ARL13AQ5H913 290 aaPredicted RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 PRSS41Q7RTY9 318 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 TRIM46Q7Z4K8 759 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 UBE3DQ7Z6J8 389 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CUZD1Q86UP6 607 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CLYBLQ8N0X4 340 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ZCCHC7Q8N3Z6 543 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 METTL27Q8N6F8 245 aaPredicted RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ACOT4Q8N9L9 421 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 TMEM102Q8N9M5 508 aaPredicted RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 PLPP5Q8NEB5 264 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 PPP1R14CQ8TAE6 165 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 RAB3IL1Q8TBN0 382 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ADAMTS17Q8TE56 1095 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 METTL21AQ8WXB1 218 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ARL8AQ96BM9 186 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 TBC1D20Q96BZ9 403 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 MTFMTQ96DP5 389 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 RNF31Q96EP0 1072 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 FER1L6-AS2Q96M78 137 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CRB3Q9BUF7 120 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 MECRQ9BV79 373 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 AICDAQ9GZX7 198 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 OR51B5Q9H339 312 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 DDX31Q9H8H2 851 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CPNE5Q9HCH3 593 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 LYRM4Q9HD34 91 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 VPS29Q9UBQ0 182 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CTSFQ9UBX1 484 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 C3orf18Q9UK00 162 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 ADAM29Q9UKF5 820 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 DAPP1Q9UN19 280 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 POLHQ9Y253 713 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 MRPS33Q9Y291 106 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 MRPS18BQ9Y676 258 aaKnown RBP6.39□□□□□ -1.39
UBBP1-201ENST00000392399 CACNA1BQ00975 2339 aa6.39□□□□□ -1.39
UBBP1-201ENST00000392399 KMT2BQ9UMN6 2715 aaPredicted RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 A0A1B0GTL3 188 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 A0A1W2PQ72 361 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 CDC14CA4D256 554 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 IDSB3KWA1 339 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 NPIPB8E9PQR5 432 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SLC28A1O00337 649 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 PEX12O00623 359 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 PLPP1O14494 284 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 KLHL41O60662 606 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 PRMT3O60678 531 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 CNOT3O75175 753 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 GUCY1B2O75343 617 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 HEXBP07686 556 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 UMODP07911 640 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ICAM2P13598 275 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 TLX1P31314 330 aaPredicted RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SSR2P43308 183 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 LIM2P55344 173 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 HSD17B7P56937 341 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 RAB38P57729 211 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 RPS18P62269 152 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 TRA2BP62995 288 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SNRPNP63162 240 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 MAT1AQ00266 395 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 GABPB1Q06547 395 aaPredicted RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SLAMF1Q13291 335 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms