RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 GGHQ92820 318 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 PLD4Q96BZ4 506 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 COQ8BQ96D53 544 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 RHBGQ9H310 441 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 NANSQ9NR45 359 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 ACSL6Q9UKU0 697 aa13.72□□□□□ -0.21
RTF1-201ENST00000389629 STRCQ7RTU9 1775 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 DAPL1A0PJW8 107 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 QSOX1O00391 747 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 PCSK2P16519 638 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 RPL4P36578 427 aaKnown RBP13.71□□□□□ -0.21
RTF1-201ENST00000389629 CXCR4P61073 352 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 PRKCDQ05655 676 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 CPZQ66K79 652 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 RAET1GQ6H3X3 334 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 CEP68Q76N32 757 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 GAL3ST1Q99999 423 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 ZNF69Q9UC07 566 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 ZFR2Q9UPR6 939 aaKnown RBP13.71□□□□□ -0.21
RTF1-201ENST00000389629 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 ATG13O75143 517 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 PLATP00750 562 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 ZNF806P0C7X5 589 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 ITGAMP11215 1152 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 HOXD10P28358 340 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 TGFBR2P37173 567 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 SSR2P43308 183 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 OMPP47874 163 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 FBXW4P57775 412 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 UGT3A2Q3SY77 523 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 ADNP2Q6IQ32 1131 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 RNF44Q7L0R7 432 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 RBM23Q86U06 439 aaKnown RBP13.71□□□□□ -0.21
RTF1-201ENST00000389629 TTC9BQ8N6N2 239 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 E2F3O00716 465 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 LYRM1O43325 122 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 ETFAP13804 333 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 FAM171BQ6P995 826 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 SHFQ7M4L6 423 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 GPR149Q86SP6 731 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 SRFBP1Q8NEF9 429 aaKnown RBP13.71□□□□□ -0.21
RTF1-201ENST00000389629 APIPQ96GX9 242 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 PTPN18Q99952 460 aa13.71□□□□□ -0.21
RTF1-201ENST00000389629 AKAP7Q9P0M2 348 aaPredicted RBP13.71□□□□□ -0.21
RTF1-201ENST00000389629 ATAD5Q96QE3 1844 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 APOC3P02656 99 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 KLK1P06870 262 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 CDH11P55287 796 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 PPP3R1P63098 170 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 MLLT1Q03111 559 aaPredicted RBP13.71□□□□□ -0.22
RTF1-201ENST00000389629 GRB14Q14449 540 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 THOC6Q86W42 341 aaKnown RBP13.71□□□□□ -0.22
RTF1-201ENST00000389629 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 EGLN2Q96KS0 407 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 RHNO1Q9BSD3 238 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 AKIP1Q9NQ31 210 aa13.71□□□□□ -0.22
RTF1-201ENST00000389629 LOC102723532A0A0G2JNH3 316 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 C2orf92A0A1B0GVN3 265 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 METTL15A6NJ78 407 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 GJB5O95377 273 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 PTHP01270 115 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 GABRR2P28476 465 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 MAGEA2P43356 314 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 ARHGEF6Q15052 776 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 KIF18BQ86Y91 864 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 SLITRK4Q8IW52 837 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 LAX1Q8IWV1 398 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 NXPE1Q8N323 547 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 SLC35B4Q969S0 331 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 RFT1Q96AA3 541 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 OR51B5Q9H339 312 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 IRAK3Q9Y616 596 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 SMLR1H3BR10 107 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 GPR1P46091 355 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 AVPR1BP47901 424 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 CARD16Q5EG05 197 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 SYT6Q5T7P8 510 aaPredicted RBP13.7□□□□□ -0.22
RTF1-201ENST00000389629 RFPL4BQ6ZWI9 263 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 GALNT7Q86SF2 657 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
RTF1-201ENST00000389629 BEND7Q8N7W2 519 aaPredicted RBP13.7□□□□□ -0.22
RTF1-201ENST00000389629 A0A0G2JPF8 293 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 CD8B2A6NJW9 211 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 HNRNPCL3B7ZW38 293 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 KMOO15229 486 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 RAB36O95755 333 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 ELFN1P0C7U0 828 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 HNRNPCL4P0DMR1 293 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 CD8BP10966 210 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 FNTBP49356 437 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 CCDC157Q569K6 752 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 IRAK1BP1Q5VVH5 260 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 GTF2IRD2BQ6EKJ0 949 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 GTF2IRD2Q86UP8 949 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 PGBD5Q8N414 524 aa13.7□□□□□ -0.22
RTF1-201ENST00000389629 FAM98AQ8NCA5 519 aaKnown RBP13.7□□□□□ -0.22
RTF1-201ENST00000389629 GALNT11Q8NCW6 608 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms