RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 SLC1A6P48664 564 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 RPS8P62241 208 aaKnown RBP-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 EWSR1Q01844 656 aaKnown RBP eCLIP-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 TAF9Q16594 264 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 ZRANB3Q5FWF4 1079 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 SLC9C2Q5TAH2 1124 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 GKAP1Q5VSY0 366 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 GALNT17Q6IS24 598 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 CYB5D1Q6P9G0 228 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 PRSS55Q6UWB4 352 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 GBP7Q8N8V2 638 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 VPS37AQ8NEZ2 397 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 SLC22A8Q8TCC7 542 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 OR5M11Q96RB7 305 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 SPIN2AQ99865 258 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 SPIN2BQ9BPZ2 258 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 SPRR2GQ9BYE4 73 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 GORASP2Q9H8Y8 452 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 TAS2R10Q9NYW0 307 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 HACL1Q9UJ83 578 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 CCPG1Q9ULG6 757 aa-0.22□□□□□ -2.44
RNU6-880P-201ENST00000384526 BDP1A6H8Y1 2624 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 LNP1A1A4G5 178 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 AP3D1O14617 1153 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 MEIS2O14770 477 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 TSPAN1O60635 241 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 PRAMEF11O60813 436 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 RECQL5O94762 991 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 TOMM70O94826 608 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 GJB5O95377 273 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 PRAMEF12O95522 483 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 MYL1P05976 194 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 RETP07949 1114 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 OR9G9P0C7N8 305 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 LAMP1P11279 417 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 UBL4AP11441 157 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 VPREB1P12018 145 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 ZP3P21754 424 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 RPL9P32969 192 aaKnown RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 BSGP35613 385 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 GRK6P43250 576 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 VAMP2P63027 116 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 SIRPAP78324 504 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 MEF2CQ06413 473 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 IKQ13123 557 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 MADCAM1Q13477 382 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 SNTB1Q13884 538 aaKnown RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 ZNF630Q2M218 657 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 KRTAP6-1Q3LI64 71 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 MCMDC2Q4G0Z9 681 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 C14orf28Q4W4Y0 310 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 LINC00483Q53H64 154 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 ZNF311Q5JNZ3 666 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 TSPO2Q5TGU0 170 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 KIAA0930Q6ICG6 404 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 TATDN1Q6P1N9 297 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 CTR9Q6PD62 1173 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 TEX38Q6PEX7 206 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 GPR65Q8IYL9 337 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 DCAF4L2Q8NA75 395 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 XXYLT1Q8NBI6 393 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 OR4C15Q8NGM1 316 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 SVIPQ8NHG7 77 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 RBM18Q96H35 190 aaKnown RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 IL12RB2Q99665 862 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 PLA2G2FQ9BZM2 168 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 KCNK15Q9H427 330 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 POLKQ9UBT6 870 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 IL36AQ9UHA7 158 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 ZNF148Q9UQR1 794 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 CACNG2Q9Y698 323 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 KCNE2Q9Y6J6 123 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 ARID2Q68CP9 1835 aa-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 SYNE1Q8NF91 8797 aaKnown RBP-0.23□□□□□ -2.45
RNU6-880P-201ENST00000384526 NEMP2A6NFY4 417 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 CASTOR2A6NHX0 329 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 EFCAB7A8K855 629 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 FAM166BA8MTA8 275 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 A8MVM7 634 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 LMO7DNF2Z398 122 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 TMX2-CTNND1H3BSU7 103 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 TRAF3IP2O43734 574 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 NUDT21O43809 227 aaKnown RBP-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 ANGPTL1O95841 491 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 DNTTP04053 509 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 SPARCP09486 303 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 SBK2P0C263 348 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 ZCCHC18P0CG32 403 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 P4HA1P13674 534 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 CD59P13987 128 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 FEN1P39748 380 aaKnown RBP-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 KIR3DL2P43630 455 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 NT5C2P49902 561 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 UBASH3AP57075 661 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 EVCP57679 992 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 CXCL9Q07325 125 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 CD47Q08722 323 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 UNC119Q13432 240 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 ABCA11PQ4W5N1 156 aa-0.24□□□□□ -2.45
RNU6-880P-201ENST00000384526 SBK1Q52WX2 424 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms