RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ZNF24P17028 368 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 CD22P20273 847 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 PTGER1P34995 402 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 CYB561P49447 251 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 CASP6P55212 293 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 POU4F1Q01851 419 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 SLC13A2Q13183 592 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 ART3Q13508 389 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 SPPL2CQ8IUH8 684 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 SCUBE1Q8IWY4 988 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 LGI4Q8N135 537 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 C17orf53Q8N3J3 647 aaPredicted RBP13.21□□□□□ -0.29
SHOX-202ENST00000381575 ZNF808Q8N4W9 903 aaPredicted RBP13.21□□□□□ -0.29
SHOX-202ENST00000381575 HORMAD2Q8N7B1 307 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 NCLNQ969V3 563 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 QRFPRQ96P65 431 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 POPDC3Q9HBV1 291 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 PRTFDC1Q9NRG1 225 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 CD274Q9NZQ7 290 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 FREM3P0C091 2139 aa13.21□□□□□ -0.3
SHOX-202ENST00000381575 F8P00451 2351 aa13.21□□□□□ -0.3
SHOX-202ENST00000381575 ANKDD1BA6NHY2 528 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 B3GALT2O43825 422 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CD1DP15813 335 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 ABOP16442 354 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 MEOX1P50221 254 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 HLCSP50747 726 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 RAB38P57729 211 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 GPX6P59796 221 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 GPR85P60893 370 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CALCOCO2Q13137 446 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 DOC2AQ14183 400 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 EFTUD2Q15029 972 aaKnown RBP eCLIP13.2□□□□□ -0.3
SHOX-202ENST00000381575 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SHOX-202ENST00000381575 XKR6Q5GH73 641 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 FGD2Q7Z6J4 655 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CMC1Q7Z7K0 106 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CCDC25Q86WR0 208 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CHERPQ8IWX8 916 aaKnown RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 CTAGE3PQ8IX95 158 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 KRT78Q8N1N4 520 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 FAM98AQ8NCA5 519 aaKnown RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 TMEM125Q96AQ2 219 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 F2RL3Q96RI0 385 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 GPR22Q99680 433 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 RBBP8Q99708 897 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 REXO4Q9GZR2 422 aaKnown RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 TXNDC16Q9P2K2 825 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 ZNF490Q9ULM2 529 aaPredicted RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 ZNF835Q9Y2P0 537 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 MMACHCQ9Y4U1 282 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 NINQ8N4C6 2090 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 C19orf84I3L1E1 186 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 RTCAO00442 366 aaKnown RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 FCHO1O14526 889 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CCNT2O60583 730 aaKnown RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 ITGA10O75578 1167 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 C1QAP02745 245 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 STMN1P16949 149 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 EPORP19235 508 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 KCNC1P48547 511 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CLCN2P51788 898 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 NR0B1P51843 470 aaKnown RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 LIM2P55344 173 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 ID2Q02363 134 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 TRADDQ15628 312 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 KRTCAP3Q53RY4 240 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 RPTNQ6XPR3 784 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 Q6ZPB1 254 aaPredicted RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 MDGA2Q7Z553 956 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CYP4Z2PQ8N1L4 340 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 TTLQ8NG68 377 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 OR2L5Q8NG80 312 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 AGAP11Q8TF27 550 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CDKL2Q92772 493 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 TSPAN17Q96FV3 270 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CPNE1Q99829 537 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 ALG9Q9H6U8 611 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 CLK4Q9HAZ1 481 aaKnown RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 WHRNQ9P202 907 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
SHOX-202ENST00000381575 KLF2Q9Y5W3 355 aaPredicted RBP13.2□□□□□ -0.3
SHOX-202ENST00000381575 PHF3Q92576 2039 aaKnown RBP13.19□□□□□ -0.3
SHOX-202ENST00000381575 SPG11Q96JI7 2443 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 NCKAP5O14513 1909 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 TFECO14948 347 aaPredicted RBP13.19□□□□□ -0.3
SHOX-202ENST00000381575 HS6ST1O60243 411 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 CDC40O60508 579 aaKnown RBP eCLIP13.19□□□□□ -0.3
SHOX-202ENST00000381575 CLEC3AO75596 197 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms