RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 SHISA5Q8N114 240 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 NFAM1Q8NET5 270 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 OR2L5Q8NG80 312 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 CCT6BQ92526 530 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 UBE2E3Q969T4 207 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 MS4A6EQ96DS6 147 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 VMP1Q96GC9 406 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 GPR22Q99680 433 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 CCDC77Q9BR77 488 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 REXO4Q9GZR2 422 aaKnown RBP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 RHBGQ9H310 441 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 KLHL31Q9H511 634 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 PRTFDC1Q9NRG1 225 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 ANKRD10Q9NXR5 420 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 PPIEQ9UNP9 301 aaKnown RBP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 KLF13Q9Y2Y9 288 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 CELSR2Q9HCU4 2923 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 KLRC4-KLRK1H3BQV0 150 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 ASNA1O43681 348 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 WISP3O95389 354 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 S100BP04271 92 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 CCDC166P0CW27 439 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 ZNF24P17028 368 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 MAOAP21397 527 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 TPP2P29144 1249 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 SPRP35270 261 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 PTGER4P35408 488 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 MTTPP55157 894 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 EFTUD2Q15029 972 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 CCDC91Q7Z6B0 441 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 SCUBE1Q8IWY4 988 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 GPALPP1Q8IXQ4 340 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 TMEM132CQ8N3T6 1108 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 KIF2BQ8N4N8 673 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 KIAA1191Q96A73 305 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 WDR34Q96EX3 536 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 PTCD3Q96EY7 689 aaKnown RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 SERINC2Q96SA4 455 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 RBBP8Q99708 897 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 COPS7BQ9H9Q2 264 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 SAYSD1Q9NPB0 183 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 ADAP2Q9NPF8 381 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 NECTIN3Q9NQS3 549 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 MTO1Q9Y2Z2 717 aaKnown RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
RPAIN-202ENST00000381208 CRYBG3Q68DQ2 2970 aa12.14□□□□□ -0.47
RPAIN-202ENST00000381208 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 CROCCQ5TZA2 2017 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 TCRBV9S1A1TA0A576 114 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 CCDC189A1A4V9 331 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 NCF1BA6NI72 391 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 FAM159BA6NKW6 160 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 NCF1CA8MVU1 366 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 NPIPA5E9PKD4 350 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 MAN1A2O60476 641 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 DNAJB6O75190 326 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 ZFAND5O76080 213 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 B3GALT4O96024 378 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 NCF1P14598 390 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 CD1DP15813 335 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 ABOP16442 354 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 TFEBP19484 476 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 SERPINB1P30740 379 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 SSTR1P30872 391 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 GDF5P43026 501 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 RAB10P61026 200 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 NAB1Q13506 487 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 ZKSCAN8Q15776 578 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 TBCCQ15814 346 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 PDK4Q16654 411 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 ZNF630Q2M218 657 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 XKR6Q5GH73 641 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 GRTP1Q5TC63 336 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 C3orf62Q6ZUJ4 267 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 LRRC70Q7Z2Q7 622 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 SIAH3Q8IW03 269 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 TMEM156Q8N614 296 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 APCDD1LQ8NCL9 501 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 PDPRQ8NCN5 879 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 SPATA4Q8NEY3 305 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 STAG3L4Q8TBR4 150 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 PHF10Q8WUB8 498 aaKnown RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 DAZLQ92904 295 aaKnown RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 HES7Q9BYE0 225 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 CD274Q9NZQ7 290 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 NPIPA1Q9UND3 350 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 YARS2Q9Y2Z4 477 aaKnown RBP12.13□□□□□ -0.47
RPAIN-202ENST00000381208 SPACA6W5XKT8 324 aa12.13□□□□□ -0.47
RPAIN-202ENST00000381208 TRBV11-1A0A0K0K1C0 115 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 ARHGAP10A1A4S6 786 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 PRRG2O14669 202 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 MYO1DO94832 1006 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 HTR1EP28566 365 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 CRABP2P29373 138 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 STX2P32856 288 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms