RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 KIR2DL1P43626 348 aaPredicted RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 GSTM5P46439 218 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 TAS2R38P59533 333 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 SELENOWP63302 87 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 DMPKQ09013 629 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 IQCCQ4KMZ1 466 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 C2orf27AQ580R0 203 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 GPR107Q5VW38 600 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 CCDC80Q76M96 950 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 CHST15Q7LFX5 561 aaPredicted RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 PAGE2Q7Z2X7 111 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 ZC3H7AQ8IWR0 971 aaKnown RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 ZNF740Q8NDX6 193 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 TPD52L3Q96J77 140 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 FANCEQ9HB96 536 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 PDP1Q9P0J1 537 aaPredicted RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 NAALAD2Q9Y3Q0 740 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 PCDHGB3Q9Y5G1 929 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 A0A1W2PRB8 838 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 H3BMQ9 156 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 SLC1A7O00341 560 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 SAP18O00422 153 aaKnown RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 MID1O15344 667 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 B4GAT1O43505 415 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 POLR2IP36954 125 aaKnown RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 CXCR4P61073 352 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 ZNF630Q2M218 657 aaPredicted RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 FAHD1Q6P587 224 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 Q6ZS52 159 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 GALNT10Q86SR1 603 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 SPARTQ8N0X7 666 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 LMNTD1Q8N9Z9 388 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 LZICQ8WZA0 190 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 COG8Q96MW5 612 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 QRFPRQ96P65 431 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 APOL4Q9BPW4 351 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 WDR26Q9H7D7 661 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 MIEF1Q9NQG6 463 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 GPATCH2Q9NW75 528 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 THUMPD1Q9NXG2 353 aaKnown RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 KIF17Q9P2E2 1029 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 TAC3Q9UHF0 121 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 PLAGL1Q9UM63 463 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 SNX5Q9Y5X3 404 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 FAM86C2PA6NEL3 165 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 IFNA14P01570 189 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 GBAP04062 536 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 TIE1P35590 1138 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 TRIM23P36406 574 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 CCR8P51685 355 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 CRYBA2P53672 197 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 CTBSQ01459 385 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 MC1RQ01726 317 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 MPEG1Q2M385 716 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 FBXO43Q4G163 708 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 DEPDC1Q5TB30 811 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 KHDRBS2Q5VWX1 349 aaKnown RBP20.56■□□□□ 0.88
TRIM54-202ENST00000380075 XAF1Q6GPH4 301 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 ANGPTL8Q6UXH0 198 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 ZNF347Q96SE7 839 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 RAPGEFL1Q9UHV5 662 aa20.56■□□□□ 0.88
TRIM54-202ENST00000380075 ADAMDEC1O15204 470 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 IL3P08700 152 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 REEP5Q00765 189 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 IL5RAQ01344 420 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 CDK5R2Q13319 367 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 RAPSNQ13702 412 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 SCARB2Q14108 478 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 AP1ARQ63HQ0 302 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 ZNF513Q8N8E2 541 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 MAL2Q969L2 176 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 MENTQ9BUN1 341 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 LGR4Q9BXB1 951 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 MS4A8Q9BY19 250 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 RIBC2Q9H4K1 309 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 LIN28AQ9H9Z2 209 aaKnown RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 PHPT1Q9NRX4 125 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 C1GALT1Q9NS00 363 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 MITFO75030 526 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 CDK4P11802 303 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 ETFAP13804 333 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 TPP2P29144 1249 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 CHI3L1P36222 383 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 PRIM2P49643 509 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 LRRC32Q14392 662 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 LAIR2Q6ISS4 152 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 CIDECQ96AQ7 238 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 CLDN23Q96B33 292 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 ZNF764Q96H86 408 aaPredicted RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 BARD1Q99728 777 aaKnown RBP20.55■□□□□ 0.88
TRIM54-202ENST00000380075 RUBCNLQ9H714 662 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 C11orf16Q9NQ32 467 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 KRT84Q9NSB2 600 aa20.55■□□□□ 0.88
TRIM54-202ENST00000380075 KCNJ13O60928 360 aa20.54■□□□□ 0.88
TRIM54-202ENST00000380075 GCM2O75603 506 aaPredicted RBP20.54■□□□□ 0.88
TRIM54-202ENST00000380075 DIRAS1O95057 198 aa20.54■□□□□ 0.88
TRIM54-202ENST00000380075 DDCP20711 480 aa20.54■□□□□ 0.88
TRIM54-202ENST00000380075 UQCRC2P22695 453 aa20.54■□□□□ 0.88
TRIM54-202ENST00000380075 GAS6Q14393 721 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms