RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 AICDAQ9GZX7 198 aa17.76■□□□□ 0.43
TMEM88B-201ENST00000378821 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.76■□□□□ 0.434e-7■■■■□ 20.2
TMEM88B-201ENST00000378821 CPSF2Q9P2I0 782 aaKnown RBP17.76■□□□□ 0.43
TMEM88B-201ENST00000378821 XPR1Q9UBH6 696 aa17.76■□□□□ 0.43
TMEM88B-201ENST00000378821 TBK1Q9UHD2 729 aa17.76■□□□□ 0.43
TMEM88B-201ENST00000378821 CRYBG3Q68DQ2 2970 aa17.76■□□□□ 0.43
TMEM88B-201ENST00000378821 SVILO95425 2214 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 URADA6NGE7 173 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 LRRC14BA6NHZ5 514 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 CLGNO14967 610 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 LRRTM2O43300 516 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 KLK8O60259 260 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 F10P00742 488 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 CRYABP02511 175 aaKnown RBP17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 JAK1P23458 1154 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 RBBP5Q15291 538 aaKnown RBP17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 PFKFB4Q16877 469 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 QSOX2Q6ZRP7 698 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 MDS2Q8NDY4 140 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 ELP5Q8TE02 316 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 TSLPQ969D9 159 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 SEC16BQ96JE7 1060 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 SCYL1Q96KG9 808 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 LPAR4Q99677 370 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 CAPS2Q9BXY5 557 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 PITHD1Q9GZP4 211 aaPredicted RBP17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 KCNK13Q9HB14 408 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 OPTCQ9UBM4 332 aa17.75■□□□□ 0.43
TMEM88B-201ENST00000378821 CROCCQ5TZA2 2017 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 IGKV3D-11A0A0A0MRZ8 115 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 A0A1B0GUH1 482 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 A8MUI8 341 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 K7EPI3 171 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 CDC123O75794 336 aaPredicted RBP17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 RASAL1O95294 804 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 B3GALT4O96024 378 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 SERPIND1P05546 499 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 RBP1P09455 135 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 CD22P20273 847 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 MST1P26927 711 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 SLCO1A2P46721 670 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 ALDH18A1P54886 795 aaKnown RBP17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 PER3P56645 1201 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 SLC26A5P58743 744 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 TUBA3CQ13748 450 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 MEP1AQ16819 746 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 TUBA3EQ6PEY2 450 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 CRLF3Q8IUI8 442 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 BEST3Q8N1M1 668 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 ARMC10Q8N2F6 343 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 SUN3Q8TAQ9 357 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 EPS8L3Q8TE67 593 aaKnown RBP17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 WDR34Q96EX3 536 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 EHD1Q9H4M9 534 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 KLHL31Q9H511 634 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 NT5DC2Q9H857 520 aa17.74■□□□□ 0.43
TMEM88B-201ENST00000378821 ITPR2Q14571 2701 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 TCRBV16S1A1N1A0A5B0 115 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 SMIM23A6NLE4 172 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 C4orf51C9J302 202 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 GOLGA8RI6L899 631 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 H2AFYO75367 372 aaKnown RBP17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 GSTM2P28161 218 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 CD96P40200 585 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 OR4D2P58180 307 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 OLR1P78380 273 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 ACTN3Q08043 901 aaPredicted RBP17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 DOC2AQ14183 400 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 NAA30Q147X3 362 aaPredicted RBP17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 ZRSR2Q15696 482 aaKnown RBP17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 XKR6Q5GH73 641 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 EMBQ6PCB8 327 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 TDRPQ86YL5 185 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 PTGR2Q8N8N7 351 aaPredicted RBP17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 SCMH1Q96GD3 660 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 MAGEB10Q96LZ2 347 aaPredicted RBP17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 RBCK1Q9BYM8 510 aa17.73■□□□□ 0.43
TMEM88B-201ENST00000378821 FOXO6A8MYZ6 492 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 MAN1A2O60476 641 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 PRMT3O60678 531 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 SIX3O95343 332 aaPredicted RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 UQCRHP07919 91 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 SBK3P0C264 359 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 RNH1P13489 461 aaKnown RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 DCTP40126 519 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 RAB8AP61006 207 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 BTG2P78543 158 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 IRF8Q02556 426 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 CHIT1Q13231 466 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 E2F2Q14209 437 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 PCBP2Q15366 365 aaKnown RBP eCLIP17.72■□□□□ 0.436e-7■■■■■ 47
TMEM88B-201ENST00000378821 ZNF766Q5HY98 468 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 FCRLBQ6BAA4 426 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 ADNP2Q6IQ32 1131 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 TMIGD1Q6UXZ0 262 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 CYP4X1Q8N118 509 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 KRT78Q8N1N4 520 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 SLC5A8Q8N695 610 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms