RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DGAT2Q96PD7 388 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 IRF2BPLQ9H1B7 796 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 PNO1Q9NRX1 252 aaKnown RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 H1F0P07305 194 aaKnown RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 MAGEA3P43357 314 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 RBBP4Q09028 425 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 ZNF517Q6ZMY9 492 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 C17orf62Q9BQA9 187 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 XKR8Q9H6D3 395 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 MKKSQ9NPJ1 570 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 COMMD3Q9UBI1 195 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 DOCK2Q92608 1830 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 SCN7AQ01118 1682 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 CCRL2O00421 344 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 AXIN1O15169 862 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 ADAMTS4O75173 837 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 C6orf47O95873 294 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 SRCP12931 536 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 ARCN1P48444 511 aaKnown RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 MAB21L1Q13394 359 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 PCBP2Q15366 365 aaKnown RBP eCLIP14.46□□□□□ -0.091e-8■■■■■ 46
NPHP4-201ENST00000378156 TSPAN33Q86UF1 283 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 GKN2Q86XP6 184 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 C15orf40Q8WUR7 153 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 RC3H2Q9HBD1 1191 aaKnown RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 RBM7Q9Y580 266 aaKnown RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 TRIM64CA6NLI5 447 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 A8MUA0 341 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 GNB5O14775 395 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 CAPN5O15484 640 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 PDYNP01213 254 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 HSD17B1P14061 328 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 POLR2CP19387 275 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-201ENST00000378156 CD72P21854 359 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 SUOXP51687 545 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 CLCN2P51788 898 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 ERVPABLB-1P60509 514 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 KIAA0319Q5VV43 1072 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 PAMR1Q6UXH9 720 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 ZFAND4Q86XD8 727 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 NFKBIDQ8NI38 313 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 ITPAQ9BY32 194 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 TBL1XR1Q9BZK7 514 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 TBC1D17Q9HA65 648 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 TREX1Q9NSU2 369 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 USP3Q9Y6I4 520 aa14.46□□□□□ -0.09
NPHP4-201ENST00000378156 CA3P07451 260 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 RBM34P42696 430 aaKnown RBP14.46□□□□□ -0.1
NPHP4-201ENST00000378156 LSAMPQ13449 338 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 ZNF234Q14588 700 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 OR56A1Q8NGH5 318 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 RNF31Q96EP0 1072 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 WDR92Q96MX6 357 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 NDC1Q9BTX1 674 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 BOCQ9BWV1 1114 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 LINC00597Q9H2U6 94 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 REEP4Q9H6H4 257 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 HRASLS2Q9NWW9 162 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 ERVK-11Q9UQG0 969 aa14.46□□□□□ -0.1
NPHP4-201ENST00000378156 PRMT3O60678 531 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 C8orf89P0DMQ9 161 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 PFKLP17858 780 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 AHCYP23526 432 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 DEFB103AP81534 67 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 PRRT3Q5FWE3 981 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 XKRXQ6PP77 449 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 FRRS1Q6ZNA5 592 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 MCEMP1Q8IX19 187 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 NCSTNQ92542 709 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 HCN3Q9P1Z3 774 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 IGLON5A6NGN9 336 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 HMGN1P05114 100 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 C6P13671 934 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 GRIK2Q13002 908 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 LASP1Q14847 261 aaKnown RBP14.45□□□□□ -0.1
NPHP4-201ENST00000378156 RAB41Q5JT25 222 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 LCN8Q6JVE9 175 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 QSOX2Q6ZRP7 698 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 CNIH3Q8TBE1 160 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 PCDHGA2Q9Y5H1 932 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 SLX4Q8IY92 1834 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 ISPDA4D126 451 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 WRBO00258 174 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 B4GALT2O60909 372 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 FUT4P22083 530 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 CPOXP36551 454 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 XKP51811 444 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 WDR5P61964 334 aaKnown RBP14.45□□□□□ -0.1
NPHP4-201ENST00000378156 RPL19P84098 196 aaKnown RBP14.45□□□□□ -0.1
NPHP4-201ENST00000378156 ALKAL1Q6UXT8 129 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 CHCHD4Q8N4Q1 142 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 CHST14Q8NCH0 376 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 ACOT12Q8WYK0 555 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 KCNH6Q9H252 994 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 TM9SF3Q9HD45 589 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 SDR39U1Q9NRG7 319 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-201ENST00000378156 NUP50Q9UKX7 468 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 H0YAE9 185 aa14.45□□□□□ -0.1
NPHP4-201ENST00000378156 SCGNO76038 276 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms