RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TMEM234Q8WY98 164 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CST11Q9H112 138 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TCF7L1Q9HCS4 588 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SEMA4BQ9NPR2 832 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 INSL6Q9Y581 213 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 NUMBLQ9Y6R0 609 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 GPR32O75388 356 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 APOFQ13790 326 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 COMMD1Q8N668 190 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PTERQ96BW5 349 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DPYSL5Q9BPU6 564 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CYP4F12Q9HCS2 524 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MRPS18AQ9NVS2 196 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SLC23A1Q9UHI7 598 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 INMT-MINDY4F8WBC2 141 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MED22Q15528 200 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 GRK1Q15835 563 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PCSK7Q16549 785 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DDX53Q86TM3 631 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TRIB2Q92519 343 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ALG5Q9Y673 324 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ANKRD28O15084 1053 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 IGHEP01854 428 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 IL32P24001 234 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MAGEA2P43356 314 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SLC6A8P48029 635 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SMAD3P84022 425 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SLC35G1Q2M3R5 365 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TRIM48Q8IWZ4 208 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 NPAS3Q8IXF0 933 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CICQ96RK0 1608 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 A0A0J9YVX5 310 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ADH1BP00325 375 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MT-ND1P03886 318 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 BMP8BP34820 402 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ARL4DP49703 201 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DHCR24Q15392 516 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SLC9B1Q4ZJI4 515 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ACTBL2Q562R1 376 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 BMP8AQ7Z5Y6 402 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 NUDT13Q86X67 352 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SORT1Q99523 831 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DGCR6LQ9BY27 220 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 VILLO15195 856 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ETFAP13804 333 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SHMT2P34897 504 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CRISP1P54107 249 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SF3B4Q15427 424 aaKnown RBP eCLIP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TIGD2Q4W5G0 525 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 NCEH1Q6PIU2 408 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 NPAS2Q99743 824 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SLAMF7Q9NQ25 335 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SPEF1Q9Y4P9 236 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 EMX1Q04741 257 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CRHR2Q13324 411 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF805Q5CZA5 627 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ADGRG2Q8IZP9 1017 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ASF1AQ9Y294 204 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MRPS23Q9Y3D9 190 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 RGS19P49795 217 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 FGD3Q5JSP0 725 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 AFMIDQ63HM1 303 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CCBE1Q6UXH8 406 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PHTF2Q8N3S3 785 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 HSPA12AO43301 675 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 GPR37L1O60883 481 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 HOXC4P09017 264 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ADH6P28332 368 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ASAH1Q13510 395 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CES5AQ6NT32 575 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 RHOUQ7L0Q8 258 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SLC41A1Q8IVJ1 513 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 NPLQ9BXD5 320 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TRDV1A0A1B0GX56 115 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TPST1O60507 370 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 IFNA21P01568 189 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 HAPLN1P10915 354 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CCR7P32248 378 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ISL1P61371 349 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PPM1JQ5JR12 505 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PDXPQ96GD0 296 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PRKCAP17252 672 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PPIGQ13427 754 aaKnown RBP eCLIP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 EPHX4Q8IUS5 362 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PDZD9Q8IXQ8 264 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 BPIFB1Q8TDL5 484 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM165Q9HC07 324 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ZFR2Q9UPR6 939 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TRAV1-2A0A0B4J238 106 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 H3BMQ9 156 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 BUD23O43709 281 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 HK1P19367 917 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DDOSTP39656 456 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 B3GNTL1Q67FW5 361 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 OR2T4Q8NH00 348 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ADAM12O43184 909 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MASP1P48740 699 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TAP2Q03519 686 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ATXN7L3BQ96GX2 97 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ZFYVE19Q96K21 471 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms