RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NPLQ9BXD5 320 aaPredicted RBP13.12□□□□□ -0.31
GPC6-201ENST00000377047 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 NLGN3Q9NZ94 848 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ARSAP15289 507 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 FAM69BQ5VUD6 431 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ZNF550Q7Z398 422 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ZNF639Q9UID6 485 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 LAMP5Q9UJQ1 280 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 PCDHGA3Q9Y5H0 932 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 CD1DP15813 335 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 DNAJB13P59910 316 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 IRF5Q13568 498 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 MARCH9Q86YJ5 346 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ZNF611Q8N823 705 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 BORCS6Q96GS4 357 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 HHIPQ96QV1 700 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 OR1F2PQ96R84 312 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 LINC00597Q9H2U6 94 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
GPC6-201ENST00000377047 CYP17A1P05093 508 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 MLLT1Q03111 559 aaPredicted RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 PLP2Q04941 152 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 PUDPQ08623 228 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 ABHD18Q0P651 414 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 TNFAIP8L3Q5GJ75 292 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 KIAA0319Q5VV43 1072 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 CARD17Q5XLA6 110 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 CHST14Q8NCH0 376 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 POLDIP3Q9BY77 421 aaKnown RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 ANKRA2Q9H9E1 313 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 PAK6Q9NQU5 681 aaPredicted RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 IGKV6-21A0A0C4DH24 114 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 LEPRP48357 1165 aaKnown RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 OR2B6P58173 313 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 SLC18A2Q05940 514 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 NPTX1Q15818 432 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 TMEM107Q6UX40 140 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 TSPAN33Q86UF1 283 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 ZNF382Q96SR6 550 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 FBRSQ9HAH7 460 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 IGKV6D-21A0A0A0MT36 114 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 SAGE2PA6NJ88 616 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 TLX2O43763 284 aaPredicted RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 CSTAP01040 98 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 RNH1P13489 461 aaKnown RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 HK1P19367 917 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 NUDT6P53370 316 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 CATSPEREQ5SY80 951 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 MFSD2AQ8NA29 543 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 LMO3Q8TAP4 145 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 NSUN5Q96P11 429 aaKnown RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 F2RL3Q96RI0 385 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 A0A1B0GVI7 797 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 APBB3O95704 486 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 CKMT2P17540 419 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 GNPDA2Q8TDQ7 276 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 OR5P2Q8WZ92 322 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 HAPLN2Q9GZV7 340 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
GPC6-201ENST00000377047 OR1E2P47887 323 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 MLLT10P55197 1068 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 RABL3Q5HYI8 236 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 RAET1LQ5VY80 246 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 KCTD7Q96MP8 289 aa13.11□□□□□ -0.31
GPC6-201ENST00000377047 CD36P16671 472 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 SUOXP51687 545 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 FBXO43Q4G163 708 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 ZNF548Q8NEK5 533 aaPredicted RBP13.1□□□□□ -0.31
GPC6-201ENST00000377047 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TTTY10Q9BZA0 68 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 IFT52Q9Y366 437 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 PRAMEF33A0A0G2JMD5 474 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TOR1BO14657 336 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 PRAMEF10O60809 474 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 DRD1P21728 446 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 PXNP49023 591 aaPredicted RBP13.1□□□□□ -0.31
GPC6-201ENST00000377047 SPINT3P49223 89 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 NFE2L1Q14494 772 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TRAM2Q15035 370 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 UBQLNLQ8IYU4 475 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 RANBP9Q96S59 729 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 MAPKAP1Q9BPZ7 522 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 HERPUD2Q9BSE4 406 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TRIM36Q9NQ86 728 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 CDH11P55287 796 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 GBX1Q14549 363 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 CARTPTQ16568 116 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TMEM17Q86X19 198 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 KRTCAP2Q8N6L1 136 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms