RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ZNF169Q14929 603 aaPredicted RBP20.78■□□□□ 0.92
SRM-201ENST00000376957 IGFBP7Q16270 282 aa20.78■□□□□ 0.92
SRM-201ENST00000376957 C10orf62Q5T681 223 aaPredicted RBP20.78■□□□□ 0.92
SRM-201ENST00000376957 PRAMEF9Q5VWM5 478 aa20.78■□□□□ 0.92
SRM-201ENST00000376957 ZNF354BQ96LW1 612 aa20.78■□□□□ 0.92
SRM-201ENST00000376957 F2RL3Q96RI0 385 aa20.78■□□□□ 0.92
SRM-201ENST00000376957 AGPAT4Q9NRZ5 378 aa20.78■□□□□ 0.92
SRM-201ENST00000376957 IGHV3-20A0A0C4DH32 117 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 A0A0G2JN53 185 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 OR2W5A6NFC9 320 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 A8MUI8 341 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 H0YIV9 168 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 E2F3O00716 465 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 TGFB1P01137 390 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 ITGAMP11215 1152 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 PTX3P26022 381 aaPredicted RBP20.77■□□□□ 0.92
SRM-201ENST00000376957 SSR2P43308 183 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 CD97P48960 835 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 ARFIP1P53367 373 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 ZNF33BQ06732 778 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 DDX39BQ13838 428 aaKnown RBP20.77■□□□□ 0.92
SRM-201ENST00000376957 KHDRBS2Q5VWX1 349 aaKnown RBP20.77■□□□□ 0.92
SRM-201ENST00000376957 TTC19Q6DKK2 380 aaPredicted RBP20.77■□□□□ 0.92
SRM-201ENST00000376957 VN1R5Q7Z5H4 357 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 SLC5A8Q8N695 610 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 GALNT11Q8NCW6 608 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 HAS2Q92819 552 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 RGMAQ96B86 450 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 MS4A8Q9BY19 250 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 TXLNGYQ9BZA5 131 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 NOL11Q9H8H0 719 aaKnown RBP20.77■□□□□ 0.92
SRM-201ENST00000376957 ZBTB20Q9HC78 741 aaPredicted RBP20.77■□□□□ 0.92
SRM-201ENST00000376957 LYRM4Q9HD34 91 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 MMP25Q9NPA2 562 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 PRTFDC1Q9NRG1 225 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 ZNF358Q9NW07 568 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 MS4A12Q9NXJ0 267 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 PLAAQ9Y263 795 aa20.77■□□□□ 0.92
SRM-201ENST00000376957 COPG1Q9Y678 874 aaKnown RBP20.77■□□□□ 0.92
SRM-201ENST00000376957 TRAV17A0A0B4J275 112 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 SIX3O95343 332 aaPredicted RBP20.76■□□□□ 0.91
SRM-201ENST00000376957 GSTA1P08263 222 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 CPSF6Q16630 551 aaKnown RBP eCLIP20.76■□□□□ 0.91
SRM-201ENST00000376957 L3MBTL4Q8NA19 623 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 Q8NA96 180 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 HUS1BQ8NHY5 278 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 TSLPQ969D9 159 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 QRFPRQ96P65 431 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 RNF32Q9H0A6 362 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.76■□□□□ 0.91
SRM-201ENST00000376957 DCDC2Q9UHG0 476 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 DAPP1Q9UN19 280 aa20.76■□□□□ 0.91
SRM-201ENST00000376957 GCN1Q92616 2671 aaKnown RBP20.76■□□□□ 0.91
SRM-201ENST00000376957 TCRBV16S1A1N1A0A5B0 115 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 FAM227AF5H4B4 570 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 CDK2AP1O14519 115 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 DNAJB6O75190 326 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 OTCP00480 354 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 MAOAP21397 527 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 TLX1P31314 330 aaPredicted RBP20.75■□□□□ 0.91
SRM-201ENST00000376957 SOX11P35716 441 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 EFNA3P52797 238 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 BTG2P78543 158 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 RUNX2Q13950 521 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 MEP1AQ16819 746 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 DEPDC1Q5TB30 811 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 GSPT2Q8IYD1 628 aaKnown RBP20.75■□□□□ 0.91
SRM-201ENST00000376957 ACOT4Q8N9L9 421 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 PSMF1Q92530 271 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 MTERF1Q99551 399 aaKnown RBP20.75■□□□□ 0.91
SRM-201ENST00000376957 NTMT1Q9BV86 223 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 AICDAQ9GZX7 198 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 PRDM7Q9NQW5 492 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 PSD3Q9NYI0 1048 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 TBK1Q9UHD2 729 aa20.75■□□□□ 0.91
SRM-201ENST00000376957 C4orf51C9J302 202 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 HIST1H1TP22492 207 aaPredicted RBP20.74■□□□□ 0.91
SRM-201ENST00000376957 CERS1P27544 350 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 LIM2P55344 173 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 SLC26A5P58743 744 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 STX4Q12846 297 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 CUL3Q13618 768 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 ELOAQ14241 798 aaKnown RBP20.74■□□□□ 0.91
SRM-201ENST00000376957 TERF2Q15554 542 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 OR4C11Q6IEV9 310 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 ADNP2Q6IQ32 1131 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 MILR1Q7Z6M3 343 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 SLC22A9Q8IVM8 553 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 CISD2Q8N5K1 135 aaKnown RBP20.74■□□□□ 0.91
SRM-201ENST00000376957 HORMAD2Q8N7B1 307 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 FAM47BQ8NA70 645 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 LRRN4CLQ8ND94 238 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 OR1N1Q8NGS0 311 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 HELZ2Q9BYK8 2649 aaKnown RBP20.74■□□□□ 0.91
SRM-201ENST00000376957 PCTPQ9UKL6 214 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 PCDHGA10Q9Y5H3 936 aa20.74■□□□□ 0.91
SRM-201ENST00000376957 SCN2AQ99250 2005 aa20.73■□□□□ 0.91
SRM-201ENST00000376957 FOXE1O00358 373 aaPredicted RBP20.73■□□□□ 0.91
SRM-201ENST00000376957 CTNSO60931 367 aa20.73■□□□□ 0.91
SRM-201ENST00000376957 CELA2AP08217 269 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms