RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CCDC166P0CW27 439 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 PRF1P14222 555 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 ZNF24P17028 368 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 HTR1EP28566 365 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 TNFRSF8P28908 595 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 TRHRP34981 398 aaPredicted RBP19.66■□□□□ 0.74
VSX1-201ENST00000376707 CLCN2P51788 898 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 RUNX2Q13950 521 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 TERF2Q15554 542 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 CDKL4Q5MAI5 379 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 XKRXQ6PP77 449 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 ZDHHC24Q6UX98 284 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 SIAH3Q8IW03 269 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 MCEMP1Q8IX19 187 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 GHDCQ8N2G8 530 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 SNX31Q8N9S9 440 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 FBXO25Q8TCJ0 367 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 UBXN10Q96LJ8 280 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 TMEM79Q9BSE2 394 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 PITHD1Q9GZP4 211 aaPredicted RBP19.66■□□□□ 0.74
VSX1-201ENST00000376707 NT5DC2Q9H857 520 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 TRIM45Q9H8W5 580 aaPredicted RBP19.66■□□□□ 0.74
VSX1-201ENST00000376707 CHST11Q9NPF2 352 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 PRTFDC1Q9NRG1 225 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 PNO1Q9NRX1 252 aaKnown RBP19.66■□□□□ 0.74
VSX1-201ENST00000376707 DNAJC11Q9NVH1 559 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 MRPS33Q9Y291 106 aaKnown RBP19.66■□□□□ 0.74
VSX1-201ENST00000376707 CREBBPQ92793 2442 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 TAPBPO15533 448 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 CLEC3AO75596 197 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 ABOP16442 354 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 STMN1P16949 149 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 GGT5P36269 586 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 SMSP52788 366 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 PLA2G16P53816 162 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 HSD17B7P56937 341 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 RAB38P57729 211 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 ATP6V0D1P61421 351 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 SLC13A2Q13183 592 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 TRADDQ15628 312 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 FBXO48Q5FWF7 155 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 TRIM40Q6P9F5 258 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 Q6ZPB1 254 aaPredicted RBP19.65■□□□□ 0.74
VSX1-201ENST00000376707 SCUBE1Q8IWY4 988 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 ARMC10Q8N2F6 343 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 CPSF7Q8N684 471 aaKnown RBP19.65■□□□□ 0.74
VSX1-201ENST00000376707 APCDD1LQ8NCL9 501 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 OR2L5Q8NG80 312 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 ADAMTS18Q8TE60 1221 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 REXO4Q9GZR2 422 aaKnown RBP19.65■□□□□ 0.74
VSX1-201ENST00000376707 EHD1Q9H4M9 534 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 FBXW2Q9UKT8 454 aa19.65■□□□□ 0.74
VSX1-201ENST00000376707 MYO7BQ6PIF6 2116 aa19.64■□□□□ 0.74
VSX1-201ENST00000376707 STK16O75716 305 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 CD1DP15813 335 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 MAGEA4P43358 317 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 HSPA7P48741 367 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 ADORA2A-AS1P86434 159 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 ZNF630Q2M218 657 aaPredicted RBP19.64■□□□□ 0.73
VSX1-201ENST00000376707 KBTBD12Q3ZCT8 623 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 XKR6Q5GH73 641 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 GRTP1Q5TC63 336 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 SULT1C3Q6IMI6 304 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 ZNF227Q86WZ6 799 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 TMEM156Q8N614 296 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 FAM47BQ8NA70 645 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 VMP1Q96GC9 406 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 CCDC77Q9BR77 488 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 COPS7BQ9H9Q2 264 aaPredicted RBP19.64■□□□□ 0.73
VSX1-201ENST00000376707 CD274Q9NZQ7 290 aa19.64■□□□□ 0.73
VSX1-201ENST00000376707 KLF13Q9Y2Y9 288 aaPredicted RBP19.64■□□□□ 0.73
VSX1-201ENST00000376707 S100BP04271 92 aaPredicted RBP19.63■□□□□ 0.73
VSX1-201ENST00000376707 SPRP35270 261 aaPredicted RBP19.63■□□□□ 0.73
VSX1-201ENST00000376707 RAB10P61026 200 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 HSF1Q00613 529 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 GUCY2DQ02846 1103 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 OR4D1Q15615 310 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 PDK4Q16654 411 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 ADPRMQ3LIE5 342 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 RNFT1Q5M7Z0 435 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 CTAGE3PQ8IX95 158 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 ZNF595Q8IYB9 648 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 POGLUT1Q8NBL1 392 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 ESAMQ96AP7 390 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 PTCD3Q96EY7 689 aaKnown RBP19.63■□□□□ 0.73
VSX1-201ENST00000376707 QRFPRQ96P65 431 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 SERINC2Q96SA4 455 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 EFCAB11Q9BUY7 163 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 PRM3Q9NNZ6 103 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 MEMO1Q9Y316 297 aa19.63■□□□□ 0.73
VSX1-201ENST00000376707 ITGA10O75578 1167 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 AGAP20933 346 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 CERS1P27544 350 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 PPP2R1BP30154 601 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 STX2P32856 288 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 MEOX1P50221 254 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 HNRNPFP52597 415 aaKnown RBP19.62■□□□□ 0.73
VSX1-201ENST00000376707 MTTPP55157 894 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 TGM3Q08188 693 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 DOC2AQ14183 400 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms