RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 MADCAM1Q13477 382 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 ZFP69Q49AA0 526 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 C19orf48Q6RUI8 117 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 MMP28Q9H239 520 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 TIGARQ9NQ88 270 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 CCDC177Q9NQR7 707 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 MRPL17Q9NRX2 175 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 SNTG1Q9NSN8 517 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 ACER3Q9NUN7 267 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 EXO1Q9UQ84 846 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 PRAMEF33A0A0G2JMD5 474 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 GNG14A0A1W2PPG7 69 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 FAM172BPA6NC97 362 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 GFYI3L273 518 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 CAPN5O15484 640 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 GASTP01350 101 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 IGFBP1P08833 259 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 C1SP09871 688 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 FEN1P39748 380 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 STARD3Q14849 445 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 LEXMQ3ZCV2 418 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 CCSMST1Q4G0I0 132 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 TTC23LQ6PF05 361 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 ZNF783Q6ZMS7 281 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 ZNF517Q6ZMY9 492 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 THOC6Q86W42 341 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 LAX1Q8IWV1 398 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 CBARPQ8N350 705 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 DCAF4L2Q8NA75 395 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 AQP11Q8NBQ7 271 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 OR5AK3PQ8NH89 298 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 ASB15Q8WXK1 588 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 C11orf24Q96F05 449 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 TRMT61AQ96FX7 289 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 SAMD11Q96NU1 681 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 OPALINQ96PE5 141 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 CDCA4Q9BXL8 241 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 SGK2Q9HBY8 427 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 TRIM39Q9HCM9 518 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 HHATLQ9HCP6 504 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 BTNL2Q9UIR0 455 aa13.52□□□□□ -0.25
CLCNKA-202ENST00000375692 NINQ8N4C6 2090 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 EFCAB10A6NFE3 127 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 MGAT4DA6NG13 374 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 LILRB3O75022 631 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CYP2A7P20853 494 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 MC1RQ01726 317 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 NAE1Q13564 534 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 SCARB2Q14108 478 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 TAF12Q16514 161 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 ARMC4Q5T2S8 1044 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 PLAG1Q6DJT9 500 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 HS6ST3Q8IZP7 471 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CCDC32Q9BV29 185 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 MAP4K5Q9Y4K4 846 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 SERTM1A2A2V5 107 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CENPXA8MT69 81 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 HIDE1A8MVS5 230 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 PRRG1O14668 218 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 ENTPD6O75354 484 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 TNFRSF21O75509 655 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CCNB2O95067 398 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CXCL14O95715 111 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 C6orf47O95873 294 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CHMP24386 653 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 TIE1P35590 1138 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 PRIM2P49643 509 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 STK19P49842 368 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CDC42P60953 191 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 DAB2P98082 770 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 TEAD4Q15561 434 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 ZNF79Q15937 498 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 TBRG1Q3YBR2 411 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 LIPJQ5W064 366 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 RETSATQ6NUM9 610 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 PSRC1Q6PGN9 363 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 KLHL17Q6TDP4 642 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 WDR53Q7Z5U6 358 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 ASCC1Q8N9N2 400 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CIDECQ96AQ7 238 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 TAPBPLQ9BX59 468 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 C11orf16Q9NQ32 467 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 CRNNQ9UBG3 495 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 V9GYH0 126 aa13.51□□□□□ -0.25
CLCNKA-202ENST00000375692 TMEM202A6NGA9 273 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 CD72P21854 359 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 CTSOP43234 321 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 TUFMP49411 452 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 MXD1Q05195 221 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 SLAMF1Q13291 335 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 RAB33AQ14088 237 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 BCDIN3DQ7Z5W3 292 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 GALNT12Q8IXK2 581 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 HJURPQ8NCD3 748 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms