RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 GATAD2BQ8WXI9 593 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 OR2AG1Q9H205 316 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TAS2R9Q9NYW1 312 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 OTOFQ9HC10 1997 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 PPM1DO15297 605 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 SLC16A6O15403 523 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 RPS19P39019 145 aaKnown RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TUFMP49411 452 aaKnown RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 SRP54P61011 504 aaKnown RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 PTSQ03393 145 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 IRF3Q14653 427 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 GCNT6Q5T4J0 391 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ERAP2Q6P179 960 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 HSD11B1LQ7Z5J1 315 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 DNAJC22Q8N4W6 341 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ENKURQ8TC29 256 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 MRPS31Q92665 395 aaKnown RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 UCN3Q969E3 161 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TSPAN18Q96SJ8 248 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 SLC30A2Q9BRI3 323 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 NDRG4Q9ULP0 352 aaKnown RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TMEM98Q9Y2Y6 226 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 N6AMT1Q9Y5N5 214 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ZNF236Q9UL36 1845 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 METTL15A6NJ78 407 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 GPX5O75715 221 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 CYBAP13498 195 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 ATP1B2P14415 290 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-202ENST00000375597 WASP42768 502 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 NRIP1P48552 1158 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 MANFP55145 182 aaKnown RBP11.3□□□□□ -0.6
MCF2L-202ENST00000375597 RING1Q06587 406 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 GRIN2CQ14957 1233 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 KIAA1161Q6NSJ0 714 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SMARCD3Q6STE5 483 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 GALNT7Q86SF2 657 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 OR7G3Q8NG95 312 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 OR2AP1Q8NGE2 309 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 CMTM7Q96FZ5 175 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 CCDC115Q96NT0 180 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 DOHHQ9BU89 302 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 HDHD5Q9BXW7 423 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SPNS1Q9H2V7 528 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 FAM83DQ9H4H8 585 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SUV39H2Q9H5I1 410 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 CCNB1IP1Q9NPC3 277 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 RPRD1BQ9NQG5 326 aaKnown RBP11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SEMA3GQ9NS98 782 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 ZDHHC3Q9NYG2 299 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 TRPS1Q9UHF7 1281 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 RIMKLBQ9ULI2 386 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 TRBV23OR9-2A0A075B6M9 112 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 TRIM64A6NGJ6 449 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SYN3O14994 580 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SGTAO43765 313 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SLC28A2O43868 658 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 IL3P08700 152 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 BMPR1AP36894 532 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 IQCCQ4KMZ1 466 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-202ENST00000375597 ATAT1Q5SQI0 421 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 IL20RBQ6UXL0 311 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 TADA1Q96BN2 335 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 HTATIP2Q9BUP3 242 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 TMEM39AQ9NV64 488 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 SLC9A8Q9Y2E8 581 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 PCDHB11Q9Y5F2 797 aa11.3□□□□□ -0.6
MCF2L-202ENST00000375597 C2orf92A0A1B0GVN3 265 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 FAM25AB3EWG3 89 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 FAM25CB3EWG5 89 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 FAM25GB3EWG6 89 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-202ENST00000375597 SRCP12931 536 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 PSMB5P28074 263 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 KCNJ10P78508 379 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 FAM124AQ86V42 546 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 CSGALNACT1Q8TDX6 532 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 SOCS4Q8WXH5 440 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 WFDC6Q9BQY6 131 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 RACGAP1Q9H0H5 632 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 NMNAT1Q9HAN9 279 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-202ENST00000375597 ASF1AQ9Y294 204 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 DYRK3O43781 588 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 SNRPD1P62314 119 aaKnown RBP11.29□□□□□ -0.6
MCF2L-202ENST00000375597 TCTN1Q2MV58 587 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 COMMD6Q7Z4G1 85 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 TRIM46Q7Z4K8 759 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 SMAP2Q8WU79 429 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-202ENST00000375597 SLC9A6Q92581 669 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
MCF2L-202ENST00000375597 RNF31Q96EP0 1072 aa11.29□□□□□ -0.6
MCF2L-202ENST00000375597 TRMT61AQ96FX7 289 aaKnown RBP11.29□□□□□ -0.6
MCF2L-202ENST00000375597 RDH12Q96NR8 316 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms