RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PAQR5Q9NXK6 330 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ACOT8O14734 319 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PRNPP04156 253 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RPS17P08708 135 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 UQCRC2P22695 453 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RGRP47804 291 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF763Q0D2J5 394 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SLC35F1Q5T1Q4 408 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 NADSYN1Q6IA69 706 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 MAMDC4Q6UXC1 1216 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 HUS1BQ8NHY5 278 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 KHSRPQ92945 711 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 DNAJA3Q96EY1 480 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SIPA1Q96FS4 1042 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 OR51E2Q9H255 320 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 MRPL15Q9P015 296 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D14Q9P2M4 693 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 DKK3Q9UBP4 350 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHGA4Q9Y5G9 962 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 C12orf71A8MTZ7 269 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 OR7A17O14581 309 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 RPP14O95059 124 aaKnown RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TYRP14679 529 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CMPK1P30085 196 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 PTGER1P34995 402 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 PTGS2P35354 604 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM107Q6UX40 140 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 LKAAEAR1Q8TD35 194 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 RASSF5Q8WWW0 418 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 MMP27Q9H306 513 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 HCN4Q9Y3Q4 1203 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 DNMT3AQ9Y6K1 912 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CACNB4O00305 520 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 RFPL2O75678 378 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 SMSP52788 366 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 BNC1Q01954 994 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 NHSL2Q5HYW2 709 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 AMZ2Q86W34 360 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 NUDT13Q86X67 352 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 GPR150Q8NGU9 434 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 OR6K6Q8NGW6 343 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 GPR151Q8TDV0 419 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 MUL1Q969V5 352 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 KCNK12Q9HB15 430 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 LTB4R2Q9NPC1 389 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TAS2R16Q9NYV7 291 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TNFRSF10DQ9UBN6 386 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 PHF11Q9UIL8 331 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHB11Q9Y5F2 797 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 GRXCR1A8MXD5 290 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 MCIDASD6RGH6 385 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 EEF1E1O43324 174 aaKnown RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TFAP2AP05549 437 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CD9P21926 228 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CDKN2CP42773 168 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CLCN2P51788 898 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 HSF5Q4G112 596 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 OTUD1Q5VV17 481 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 UBE2UQ5VVX9 321 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 PNCKQ6P2M8 343 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TUBA3EQ6PEY2 450 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 SH2D5Q6ZV89 423 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 NAGSQ8N159 534 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 COX18Q8N8Q8 333 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 LMNTD1Q8N9Z9 388 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 NCSTNQ92542 709 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 RHBDF1Q96CC6 855 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 RDH12Q96NR8 316 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 C17orf62Q9BQA9 187 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 IL20RAQ9UHF4 553 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHGA8Q9Y5G5 932 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 B3GALT2O43825 422 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 SLC25A12O75746 678 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CAPN15O75808 1086 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 NCR1O76036 304 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 FAM163BP0C2L3 166 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 AMD1P17707 334 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CBLP22681 906 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 GRPRP30550 384 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 MAGEA11P43364 429 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 RELAQ04206 551 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 COQ5Q5HYK3 327 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 ADGRG2Q8IZP9 1017 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 XKR8Q9H6D3 395 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM27Q9HBJ8 222 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 COMMD9Q9P000 198 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 STUB1Q9UNE7 303 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 NRXN2Q9P2S2 1712 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 MROH6A6NGR9 719 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF195O14628 629 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 CSN2P05814 226 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 RPS3P23396 243 aaKnown RBP eCLIP6.29□□□□□ -1.42e-7■□□□□ 9.5
SMC1A-202ENST00000375340 CRHBPP24387 322 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 MAGEA12P43365 314 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 GPR17Q13304 367 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 PRPF38BQ5VTL8 546 aaKnown RBP6.29□□□□□ -1.4
SMC1A-202ENST00000375340 TPRG1Q6ZUI0 275 aa6.29□□□□□ -1.4
SMC1A-202ENST00000375340 LCN9Q8WX39 176 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms