RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ATXN7L2Q5T6C5 722 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 GCNT7Q6ZNI0 430 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SLC13A3Q8WWT9 602 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SGTBQ96EQ0 304 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 DIRAS2Q96HU8 199 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 HEBP1Q9NRV9 189 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 TMEM248Q9NWD8 314 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 GPR83Q9NYM4 423 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 PCDHGA6Q9Y5G7 932 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 FKBP7Q9Y680 259 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 IQCMA0A1B0GVH7 501 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 OR51F1A6NGY5 319 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 H0YC42 278 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 AGRPO00253 132 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 WDPCPO95876 746 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 PAHP00439 452 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 PROS1P07225 676 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 PRKAR1AP10644 381 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 EVI2BP34910 448 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 GPC1P35052 558 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 FLYWCH1Q4VC44 716 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 TRIQKQ629K1 86 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 GPR139Q6DWJ6 353 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 LIPIQ6XZB0 460 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF605Q86T29 641 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 PIM3Q86V86 326 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 PGBD5Q8N414 524 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SLC37A3Q8NCC5 494 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 OR6P1Q8NGX9 317 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 OR2T11Q8NH01 316 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 CLHC1Q8NHS4 586 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 NETO1Q8TDF5 533 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SH3RF2Q8TEC5 729 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 UFD1Q92890 307 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 FAM120BQ96EK7 910 aaKnown RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 ZC3HAV1LQ96H79 300 aaKnown RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 KLF16Q9BXK1 252 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 ZDHHC4Q9NPG8 344 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SNTG1Q9NSN8 517 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 RBFOX1Q9NWB1 397 aaKnown RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 UBQLN2Q9UHD9 624 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SCML1Q9UN30 329 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SAMD4AQ9UPU9 718 aaKnown RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 A0A1B0GTL3 188 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 FAM220BPB1ANY3 271 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 SLC43A1O75387 559 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 WISP3O95389 354 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 VIPP01282 170 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 MTHFD2P13995 350 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ARSBP15848 533 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 RENBPP51606 427 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 MAP2K6P52564 334 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GEMP55040 296 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GPR85P60893 370 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ST3GAL4Q11206 333 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF273Q14593 569 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 LARS2Q15031 903 aaKnown RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 MAPKAPK3Q16644 382 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 C19orf48Q6RUI8 117 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 TIGD4Q8IY51 512 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF683Q8IZ20 524 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 OR52H1Q8NGJ2 320 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 RHEBL1Q8TAI7 183 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 KIAA1143Q96AT1 154 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GFM1Q96RP9 751 aaKnown RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 BARHL1Q9BZE3 327 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 SLC6A17Q9H1V8 727 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 MTIF3Q9H2K0 278 aaKnown RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 C1orf109Q9NX04 203 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 RDH8Q9NYR8 311 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GLS2Q9UI32 602 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 NEUROG3Q9Y4Z2 214 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 HRH3Q9Y5N1 445 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 CLCA3PQ9Y6N3 262 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 TRIOO75962 3097 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 F5P12259 2224 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 TRANK1O15050 2925 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF98A6NK75 572 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 FABP7O15540 132 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 SGTAO43765 313 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 LILRB3O75022 631 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GPX5O75715 221 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF682O95780 498 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 MLYCDO95822 493 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 RHOP08100 348 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 G6PDP11413 515 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 NUDT6P53370 316 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 CRISP3P54108 245 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 OR4D1Q15615 310 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 RBBP7Q16576 425 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 POM121L1PQ3SYA9 428 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 LRRC73Q5JTD7 316 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ARTNQ5T4W7 220 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 KLHDC8BQ8IXV7 354 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 APCDD1Q8J025 514 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 DUSP18Q8NEJ0 188 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms