RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PPP3R1P63098 170 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 ATAT1Q5SQI0 421 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 NCEH1Q6PIU2 408 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 BMP8AQ7Z5Y6 402 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 CHERPQ8IWX8 916 aaKnown RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SPARTQ8N0X7 666 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 NETO1Q8TDF5 533 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 BEX2Q9BXY8 128 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 RC3H2Q9HBD1 1191 aaKnown RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 CPNE5Q9HCH3 593 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 WDR45Q9Y484 360 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SPO11Q9Y5K1 396 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 IRS2Q9Y4H2 1338 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SLC16A5O15375 505 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 PROM1O43490 865 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 RPS17P08708 135 aaKnown RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 C1GALT1C1LP0DN25 315 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 RPS3P23396 243 aaKnown RBP eCLIP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 ERVK-21P61565 698 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SMU1Q2TAY7 513 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 C18orf21Q32NC0 220 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 PROX2Q3B8N5 592 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 DPY19L3Q6ZPD9 716 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 LRRTM3Q86VH5 581 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 CLECL1Q8IZS7 167 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 GRHL3Q8TE85 626 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SPATA9Q9BWV2 254 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 TREX1Q9NSU2 369 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 TDP1Q9NUW8 608 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 PPIEQ9UNP9 301 aaKnown RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 PCDHGA8Q9Y5G5 932 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 INSL5Q9Y5Q6 135 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 RGPD5Q99666 1765 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 INPPL1O15357 1258 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 MMP20O60882 483 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 INHAP05111 366 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 TACSTD2P09758 323 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 C8orf89P0DMQ9 161 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 TYRP14679 529 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 AGXTP21549 392 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 AHCYP23526 432 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ACADLP28330 430 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 MAP2K3P46734 347 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 IGFN1Q86VF2 1251 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 LILRA2Q8N149 483 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 OR51G2Q8NGK0 314 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 OSTF1Q92882 214 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 TMEM45AQ9NWC5 275 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GPR83Q9NYM4 423 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GPR45Q9Y5Y3 372 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 HEBP2Q9Y5Z4 205 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 TCRBV5S1A1TA0A578 114 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 FAAHO00519 579 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 STC2O76061 302 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 MPC1LP0DKB6 136 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 AP2S1P53680 142 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 OR12D2P58182 307 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 PON3Q15166 354 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 SLC35F1Q5T1Q4 408 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 TMCO2Q7Z6W1 182 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 DCP2Q8IU60 420 aaKnown RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 CNTN4Q8IWV2 1026 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 HDDC3Q8N4P3 179 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 MCHR1Q99705 422 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 LGR4Q9BXB1 951 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 OR51I1Q9H343 314 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 C14orf105Q9NVL8 296 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 EXTL2Q9UBQ6 330 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ETFAP13804 333 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 RHCEP18577 417 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ALAS2P22557 587 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GADD45AP24522 165 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 EDNRAP25101 427 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 CD40LGP29965 261 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 STK19P49842 368 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 CDKN1CP49918 316 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GNG2P59768 71 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 UGT8Q16880 541 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 C4orf46Q504U0 113 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ARHGAP12Q8IWW6 846 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 CD200R1Q8TD46 325 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 OR5P2Q8WZ92 322 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 HERVK_113Q902F9 699 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 NKD1Q969G9 470 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GAL3ST4Q96RP7 486 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 KXD1Q9BQD3 176 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 BOCQ9BWV1 1114 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 PAQR5Q9NXK6 330 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 RDH8Q9NYR8 311 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms