RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RAB23Q9ULC3 237 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 GPSM3Q9Y4H4 160 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 SPEGQ15772 3267 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 hCG_2014768A0A024R1R8 64 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 A0A1W2PQU0 124 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 KMOO15229 486 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 PPIBP23284 216 aaKnown RBP15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 DCKP27707 260 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 SLC19A1P41440 591 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 MAP2K4P45985 399 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 DGKEP52429 567 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 SELENOWP63302 87 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 CLCA4Q14CN2 919 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 DEPDC1Q5TB30 811 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 B3GNT8Q7Z7M8 397 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 CCDC71Q8IV32 467 aaPredicted RBP15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 OR52N2Q8NGI0 321 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 RAB8BQ92930 207 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 UBE2E3Q969T4 207 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 OTUB1Q96FW1 271 aaPredicted RBP15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 AIF1LQ9BQI0 150 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 CD93Q9NPY3 652 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 C1GALT1Q9NS00 363 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 TEX10Q9NXF1 929 aaPredicted RBP15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 ERVK-18Q9QC07 812 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 CORO2BQ9UQ03 480 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 CA5BQ9Y2D0 317 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 DENND4AQ7Z401 1863 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 GLOD5A6NK44 160 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 PDZK1P1A8MUH7 402 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 TMPRSS11DO60235 418 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 POU2F1P14859 743 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 ZNF182P17025 639 aaPredicted RBP15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 CCR8P51685 355 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 CDH12P55289 794 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 CDK6Q00534 326 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 RPA4Q13156 261 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 GANABQ14697 944 aaKnown RBP15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 TMEM31Q5JXX7 168 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 CXorf40BQ96DE9 158 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 TEX101Q9BY14 249 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 MS4A8Q9BY19 250 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 LHX9Q9NQ69 397 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 PRDM8Q9NQV8 689 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 IGKV1-8A0A0C4DH67 115 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 K7EQS6 105 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 VIPP01282 170 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 BSGP35613 385 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 CCR3P51677 355 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 SH3BGRP55822 239 aaPredicted RBP15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 DLX2Q07687 328 aaPredicted RBP15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 SGCGQ13326 291 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 KRT33BQ14525 404 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 ITPRIPL2Q3MIP1 535 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 CCDC81Q6ZN84 652 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 OXR1Q8N573 874 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 TP53I13Q8NBR0 393 aaPredicted RBP15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 GOT1L1Q8NHS2 421 aaPredicted RBP15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 GAB3Q8WWW8 586 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 TM4SF18Q96CE8 201 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 NODALQ96S42 347 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 C17orf62Q9BQA9 187 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 GABARAPL1Q9H0R8 117 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 OBP2AQ9NY56 170 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 CKAP5Q14008 2032 aa15.24■□□□□ 0.03
CNKSR1-202ENST00000374253 PRAMEF10O60809 474 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 C9P02748 559 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 ITGAMP11215 1152 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 MANFP55145 182 aaKnown RBP15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 SPIBQ01892 262 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 BNIP3Q12983 259 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 RFX4Q33E94 735 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 OLIG3Q7RTU3 272 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 HMGN2P46Q86SG4 172 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 DNAJC5GQ8N7S2 189 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 SMPDL3AQ92484 453 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 CSF3RQ99062 836 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 FEVQ99581 238 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3DA0A087WVF3 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3IA0A087WXS9 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3EA0A087X179 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3KA0A087X1G2 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3FA6NER0 549 aaPredicted RBP15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3LB9A6J9 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TNFRSF11BO00300 401 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 SH3BP5O60239 455 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3HP0C7X1 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 ALPPL2P10696 532 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 ENTPD1P49961 510 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 RPP38P78345 283 aaKnown RBP15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 HYAL1Q12794 435 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 BIRC2Q13490 618 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TEAD4Q15561 434 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3GQ6DHY5 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3CQ6IPX1 549 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 CEACAM20Q6UY09 585 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D3Q8IZP1 549 aaPredicted RBP15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 KIAA1958Q8N8K9 716 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 MAGED4Q96JG8 741 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TRMT61BQ9BVS5 477 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms