RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ZNF823P16415 610 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 IL12BP29460 328 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 SOX9P48436 509 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 NRG3P56975 720 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 HMGCS1Q01581 520 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 LRRC32Q14392 662 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 TLR1Q15399 786 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 RAB30Q15771 203 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 ARSIQ5FYB1 569 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 CLEC14AQ86T13 490 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 SLC9B2Q86UD5 537 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 RGL4Q8IZJ4 473 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 SLC43A2Q8N370 569 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 TTC9BQ8N6N2 239 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 AQP11Q8NBQ7 271 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 NFKBIDQ8NI38 313 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 SORT1Q99523 831 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 C11orf49Q9H6J7 331 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 CNOT2Q9NZN8 540 aaKnown RBP10.21□□□□□ -0.78
PGK1-201ENST00000373316 RNASET2O00584 256 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 FHP07954 510 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 SEC23BQ15437 767 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 PLEKHG7Q6ZR37 379 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 BPIFB1Q8TDL5 484 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 TFGQ92734 400 aaPredicted RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 PPP1R14AQ96A00 147 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 GSTO2Q9H4Y5 243 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 NSUN3Q9H649 340 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 UTS2RQ9UKP6 389 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 COL6A3P12111 3177 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 ENPP3O14638 875 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 COCHO43405 550 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 MATN1P21941 496 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 RPL34P49207 117 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 RPS15AP62244 130 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 RHAGQ02094 409 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 KCNAB2Q13303 367 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 HSDL2Q6YN16 418 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 ARNTL2Q8WYA1 636 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 HERVK_113Q902F9 699 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 SLC39A3Q9BRY0 314 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 SLC2A4RGQ9NR83 387 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 MARK1Q9P0L2 795 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 MRPS7Q9Y2R9 242 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 FAM172BPA6NC97 362 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 ELOA3DA6NLF2 546 aaPredicted RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 CASC3O15234 703 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 SCGNO76038 276 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 TOP3BO95985 862 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 HOXC8P31273 242 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 MAGEA12P43365 314 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 CD47Q08722 323 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 ELOA3BQ3SY89 546 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 CEP97Q8IW35 865 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 ELOA3Q8NG57 546 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 SFXN5Q8TD22 340 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 ZNF675Q8TD23 568 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 IRF7Q92985 503 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 ITFG2Q969R8 447 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 PNPLA2Q96AD5 504 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 FUBP1Q96AE4 644 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 FRMD6Q96NE9 622 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 MTERF1Q99551 399 aaKnown RBP10.2□□□□□ -0.78
PGK1-201ENST00000373316 IKZF2Q9UKS7 526 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 DNAJC15Q9Y5T4 150 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 TMEM14AQ9Y6G1 99 aa10.2□□□□□ -0.78
PGK1-201ENST00000373316 FSHRP23945 695 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 KCNC1P48547 511 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 KCNQ1P51787 676 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CRISP1P54107 249 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CDH11P55287 796 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 FPGSQ05932 587 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 PGM2L1Q6PCE3 622 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 FRRS1Q6ZNA5 592 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 ZNF765Q7L2R6 523 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 LRRTM3Q86VH5 581 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 TP53INP2Q8IXH6 220 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 ZMIZ2Q8NF64 920 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 OR14C36Q8NHC7 312 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 SGCDQ92629 289 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 DPF3Q92784 378 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 RHBDF1Q96CC6 855 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 KCNC2Q96PR1 638 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 C7orf50Q9BRJ6 194 aaKnown RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 RANBP3Q9H6Z4 567 aaPredicted RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 AGPAT4Q9NRZ5 378 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 FAIMQ9NVQ4 179 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 FBXW2Q9UKT8 454 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 SPO11Q9Y5K1 396 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 JRKO75564 520 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CD68P34810 354 aaPredicted RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 GPR143P51810 404 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 DGKQP52824 942 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 PPP5CP53041 499 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 GPNMBQ14956 572 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 PON3Q15166 354 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 WSCD2Q2TBF2 565 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CLLU1OSQ5K130 101 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 KIAA1161Q6NSJ0 714 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms