RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TRIM39Q9HCM9 518 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 TAS2R9Q9NYW1 312 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ITGB1BP2Q9UKP3 347 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 MN1Q10571 1320 aaPredicted RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 PIPSLA2A3N6 862 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 PLK4O00444 970 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 LRG1P02750 347 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 ARAFP10398 606 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 SLC15A1P46059 708 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 SLBPQ14493 270 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 BCL2A1Q16548 175 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 TMEM220Q6QAJ8 160 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 KIAA0907Q7Z7F0 614 aaPredicted RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 C9orf43Q8TAL5 461 aaPredicted RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 APOBEC4Q8WW27 367 aaKnown RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 FOPNLQ96NB1 174 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 EFCAB11Q9BUY7 163 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 TAS2R16Q9NYV7 291 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 CNOT2Q9NZN8 540 aaKnown RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 KCND3Q9UK17 655 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 DUSP12Q9UNI6 340 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 MAP4K5Q9Y4K4 846 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 ENPP4Q9Y6X5 453 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 PLXND1Q9Y4D7 1925 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 DSPPQ9NZW4 1301 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 SH3D21A4FU49 640 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 SAP18O00422 153 aaKnown RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 HAT1O14929 419 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 PTTG1O95997 202 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 TGFB1P01137 390 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 C1GALT1C1LP0DN25 315 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 POU2F1P14859 743 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 SPNP16150 400 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 CHMP24386 653 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 RPL3P39023 403 aaKnown RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 RECQLP46063 649 aaPredicted RBP12.19□□□□□ -0.46
CTPS1-202ENST00000372621 C2orf80Q0P641 193 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 DMC1Q14565 340 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 LILRA6Q6PI73 481 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 KLHL17Q6TDP4 642 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 METTL4Q8N3J2 472 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 SLAIN1Q8ND83 568 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 OR5AK3PQ8NH89 298 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 HTRA1Q92743 480 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 MTERF3Q96E29 417 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 Q96MT0 163 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 OR5M11Q96RB7 305 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 MAPKAP1Q9BPZ7 522 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 KLHL25Q9H0H3 589 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 SPNS1Q9H2V7 528 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF556Q9HAH1 456 aa12.19□□□□□ -0.46
CTPS1-202ENST00000372621 LILRB5O75023 590 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 CCNB2O95067 398 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 GASTP01350 101 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 RHCEP18577 417 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 LAG3P18627 525 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 MMP12P39900 470 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 SEPHS1P49903 392 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 TAS2R50P59544 299 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 KCNJ8Q15842 424 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 IER5LQ5T953 404 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 CNKSR3Q6P9H4 555 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 GPR65Q8IYL9 337 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 POC5Q8NA72 575 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 GTPBP3Q969Y2 492 aaKnown RBP12.18□□□□□ -0.46
CTPS1-202ENST00000372621 EFHD2Q96C19 240 aaPredicted RBP12.18□□□□□ -0.46
CTPS1-202ENST00000372621 CHCHD6Q9BRQ6 235 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 TAPBPLQ9BX59 468 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 OR51B5Q9H339 312 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 IMPAD1Q9NX62 359 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 NUP210Q8TEM1 1887 aaPredicted RBP12.18□□□□□ -0.46
CTPS1-202ENST00000372621 H3BM21 787 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF197O14709 1029 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 GADD45GO95257 159 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 IFNA14P01570 189 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 TYRP14679 529 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 GTF2E2P29084 291 aaKnown RBP12.18□□□□□ -0.46
CTPS1-202ENST00000372621 HOXD12P35452 270 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 TPTEP56180 551 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 CYP4F2P78329 520 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 LIPIQ6XZB0 460 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 CYP4Z2PQ8N1L4 340 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 LMNTD1Q8N9Z9 388 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 IRF7Q92985 503 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 PEX16Q9Y5Y5 336 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
CTPS1-202ENST00000372621 EFCAB10A6NFE3 127 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 FFAR1O14842 300 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 ZW10O43264 779 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 SNX4O95219 450 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 S100A5P33763 92 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 CDC42P60953 191 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 PUM1Q14671 1186 aaKnown RBP eCLIP12.18□□□□□ -0.46
CTPS1-202ENST00000372621 GANABQ14697 944 aaKnown RBP12.18□□□□□ -0.46
CTPS1-202ENST00000372621 DUSP7Q16829 419 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF805Q5CZA5 627 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 UNC5DQ6UXZ4 953 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 SYTL1Q8IYJ3 562 aa12.18□□□□□ -0.46
CTPS1-202ENST00000372621 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms