RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 AMZ1Q400G9 498 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 GTDC1Q4AE62 458 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 ADNP2Q6IQ32 1131 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 AMIGO1Q86WK6 493 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 ZNF597Q96LX8 424 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 EFCAB11Q9BUY7 163 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 SRMSQ9H3Y6 488 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 EHD1Q9H4M9 534 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 CCDC177Q9NQR7 707 aaPredicted RBP15.3■□□□□ 0.04
C9orf78-201ENST00000372447 SLC6A13Q9NSD5 602 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 DLL3Q9NYJ7 618 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 SH2B3Q9UQQ2 575 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 AK5Q9Y6K8 562 aa15.3■□□□□ 0.04
C9orf78-201ENST00000372447 DPPA5A6NC42 116 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 TPST1O60507 370 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 RFPL3O75679 317 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 RPLP0P05388 317 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 KIR3DL1P43629 444 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 C21orf58P58505 322 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 SRSF11Q05519 484 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 ILKQ13418 452 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 SPIN4Q56A73 249 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 PAGE2BQ5JRK9 111 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 C6orf52Q5T4I8 152 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 C10orf62Q5T681 223 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 ZBTB49Q6ZSB9 765 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 USP53Q70EK8 1073 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 ANKRD46Q86W74 232 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 TMEM132CQ8N3T6 1108 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 SLC5A11Q8WWX8 675 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 RSC1A1Q92681 617 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 CENPNQ96H22 339 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 SLC29A1Q99808 456 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 INPP5KQ9BT40 448 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 LRRN3Q9H3W5 708 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 KAT8Q9H7Z6 458 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 PRM3Q9NNZ6 103 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 PCDHGA1Q9Y5H4 931 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 C7orf72A4D263 438 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 OR6C74A6NCV1 312 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 BTN3A3O00478 584 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 GSTA4O15217 222 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 ZW10O43264 779 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 PROS1P07225 676 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 FTH1P19P0C7X4 201 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 HOXB9P17482 250 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 PKLRP30613 574 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 RAB28P51157 221 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 HNRNPFP52597 415 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 CHN2P52757 468 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 POLE2P56282 527 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 RPS13P62277 151 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 GPLD1P80108 840 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 CFHR1Q03591 330 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 SLBPQ14493 270 aaKnown RBP eCLIP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 HIST2H2ACQ16777 129 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 UGT8Q16880 541 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 HIST2H2AA3Q6FI13 130 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 OR4F3Q6IEY1 312 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 PPP4R4Q6NUP7 873 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 NXPE4Q6UWF7 544 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 UGT2A3Q6UWM9 527 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 LAS2Q8IYD9 372 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 ADGRF3Q8IZF5 1079 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 C2orf73Q8N5S3 287 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 C1orf52Q8N6N3 182 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 LINC01555Q8NAE3 123 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 OR10G6Q8NH81 332 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 CHTF18Q8WVB6 975 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 AHCYL2Q96HN2 611 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 GBP5Q96PP8 586 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 CPPED1Q9BRF8 314 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 ABCG4Q9H172 646 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 GORASP2Q9H8Y8 452 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 GEMIN8Q9NWZ8 242 aaKnown RBP15.29■□□□□ 0.04
C9orf78-201ENST00000372447 PDP2Q9P2J9 529 aa15.29■□□□□ 0.04
C9orf78-201ENST00000372447 UNC13CQ8NB66 2214 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 ELOVL7A1L3X0 281 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 FOXE1O00358 373 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-201ENST00000372447 NTN3O00634 580 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-201ENST00000372447 RFXANKO14593 260 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 KDM1AO60341 852 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 DKK1O94907 266 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 B3GALT4O96024 378 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 CDH1P12830 882 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 COX7A2P14406 83 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 PTPN6P29350 595 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 SHMT2P34897 504 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 CDKN2CP42773 168 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 RAE1P78406 368 aaKnown RBP15.28■□□□□ 0.04
C9orf78-201ENST00000372447 SQSTM1Q13501 440 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 MAP7Q14244 749 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 SF1Q15637 639 aaKnown RBP15.28■□□□□ 0.04
C9orf78-201ENST00000372447 INTS11Q5TA45 600 aaKnown RBP15.28■□□□□ 0.04
C9orf78-201ENST00000372447 THEMIS2Q5TEJ8 643 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 OR52E8Q6IFG1 317 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 TMPRSS9Q7Z410 1059 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 OR7A2PQ8NGA2 310 aa15.28■□□□□ 0.04
C9orf78-201ENST00000372447 STARD8Q92502 1023 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms