RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 PRDM9Q9NQV7 894 aa18.81■□□□□ 0.6
TMEM53-205ENST00000372244 DAPP1Q9UN19 280 aa18.81■□□□□ 0.6
TMEM53-205ENST00000372244 RNF11Q9Y3C5 154 aa18.81■□□□□ 0.6
TMEM53-205ENST00000372244 SCN2AQ99250 2005 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 UBR5O95071 2799 aaPredicted RBP18.8■□□□□ 0.6
TMEM53-205ENST00000372244 TCRBV16S1A1N1A0A5B0 115 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 CYR61O00622 381 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 SCELO95171 688 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 ATP5A1P25705 553 aaKnown RBP18.8■□□□□ 0.6
TMEM53-205ENST00000372244 LIM2P55344 173 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 CPSF6Q16630 551 aaKnown RBP eCLIP18.8■□□□□ 0.6
TMEM53-205ENST00000372244 KHDRBS2Q5VWX1 349 aaKnown RBP18.8■□□□□ 0.6
TMEM53-205ENST00000372244 H3F3CQ6NXT2 135 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 OR52B6Q8NGF0 335 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 M1APQ8TC57 530 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 PPP4R1Q8TF05 950 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 UBLCP1Q8WVY7 318 aaPredicted RBP18.8■□□□□ 0.6
TMEM53-205ENST00000372244 MIB2Q96AX9 1013 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 NSUN5Q96P11 429 aaKnown RBP18.8■□□□□ 0.6
TMEM53-205ENST00000372244 ROGDIQ9GZN7 287 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 TBK1Q9UHD2 729 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 CLDN16Q9Y5I7 305 aa18.8■□□□□ 0.6
TMEM53-205ENST00000372244 A0A1W2PPM1 405 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 A8MT66 165 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 ESPNB1AK53 854 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 FOXE1O00358 373 aaPredicted RBP18.79■□□□□ 0.6
TMEM53-205ENST00000372244 CLDN9O95484 217 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 GSTA1P08263 222 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 RPS17P08708 135 aaKnown RBP18.79■□□□□ 0.6
TMEM53-205ENST00000372244 PYGBP11216 843 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 MAOAP21397 527 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 RAB38P57729 211 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 OR4D2P58180 307 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 VSNL1P62760 191 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 ACTN3Q08043 901 aaPredicted RBP18.79■□□□□ 0.6
TMEM53-205ENST00000372244 EXT1Q16394 746 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 PAPD4Q6PIY7 484 aaKnown RBP18.79■□□□□ 0.6
TMEM53-205ENST00000372244 ZNF793Q6ZN11 406 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 MYLK4Q86YV6 388 aaPredicted RBP18.79■□□□□ 0.6
TMEM53-205ENST00000372244 SCUBE1Q8IWY4 988 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 CYP4X1Q8N118 509 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 ACOT4Q8N9L9 421 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 WDR20Q8TBZ3 569 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 ADAMTS18Q8TE60 1221 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 HAS2Q92819 552 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 REPS1Q96D71 796 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 MTERF1Q99551 399 aaKnown RBP18.79■□□□□ 0.6
TMEM53-205ENST00000372244 LPAR4Q99677 370 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 OR51B5Q9H339 312 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 LYRM4Q9HD34 91 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 MMP25Q9NPA2 562 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 SLAMF7Q9NQ25 335 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 DMRT3Q9NQL9 472 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 NECTIN3Q9NQS3 549 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 PTGFRNQ9P2B2 879 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 PLAAQ9Y263 795 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 MMACHCQ9Y4U1 282 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 CSAG2Q9Y5P2 127 aa18.79■□□□□ 0.6
TMEM53-205ENST00000372244 GOLGA8RI6L899 631 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
TMEM53-205ENST00000372244 HIST1H1TP22492 207 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-205ENST00000372244 PTX3P26022 381 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-205ENST00000372244 CERS1P27544 350 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 HSD17B3P37058 310 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 ARFIP1P53367 373 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 HSD17B7P56937 341 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 KCNC4Q03721 635 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 BTBD16Q32M84 506 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 LINC00696Q6ZRV3 163 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 CUZD1Q86UP6 607 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 ZNF595Q8IYB9 648 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 RNF175Q8N4F7 328 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 SIRT6Q8N6T7 355 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 TMEM52Q8NDY8 209 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 DNAJB14Q8TBM8 379 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 CPT1CQ8TCG5 803 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 ZNF483Q8TF39 744 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-205ENST00000372244 CDK15Q96Q40 435 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 EPS8L2Q9H6S3 715 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 DCDC2Q9UHG0 476 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 PPT2Q9UMR5 302 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 FLNCQ14315 2725 aa18.78■□□□□ 0.6
TMEM53-205ENST00000372244 RTCAO00442 366 aaKnown RBP18.77■□□□□ 0.6
TMEM53-205ENST00000372244 PPP6CO00743 305 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 CLDN4O14493 209 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 DLX3O60479 287 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 TSFMP43897 325 aaKnown RBP18.77■□□□□ 0.6
TMEM53-205ENST00000372244 CCNG1P51959 295 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 HNRNPFP52597 415 aaKnown RBP18.77■□□□□ 0.6
TMEM53-205ENST00000372244 HERVK_113P63132 956 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 TRAF3Q13114 568 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 ZRSR2Q15696 482 aaKnown RBP18.77■□□□□ 0.6
TMEM53-205ENST00000372244 INPP5JQ15735 1006 aaPredicted RBP18.77■□□□□ 0.6
TMEM53-205ENST00000372244 AP5B1Q2VPB7 878 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 B3GNTL1Q67FW5 361 aaPredicted RBP18.77■□□□□ 0.6
TMEM53-205ENST00000372244 OR4C11Q6IEV9 310 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 WDR93Q6P2C0 686 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 ATP6V1E2Q96A05 226 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 RGMAQ96B86 450 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 ERVK-6Q9BXR3 956 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms