RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 H0YGN5 161 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 PEPDP12955 493 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 NTSR1P30989 418 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 MLIPQ5VWP3 458 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM91A1Q658Y4 838 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 LINGO2Q7L985 606 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 WDR92Q96MX6 357 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 CENPOQ9BU64 300 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 DUSP26Q9BV47 211 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 ACTR3BQ9P1U1 418 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 ACSL5Q9ULC5 683 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 PFKLP17858 780 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 RYKP34925 604 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 DNASE1L1P49184 302 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 RAB5CP51148 216 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPX6P59796 221 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 RHDQ02161 417 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 TBC1D25Q3MII6 688 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 DPY19L3Q6ZPD9 716 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 DCUN1D3Q8IWE4 304 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM3CQ92520 227 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 CDK15Q96Q40 435 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 VPS29Q9UBQ0 182 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 BHLHE40O14503 412 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 CSTF1Q05048 431 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 EIPR1Q53HC9 387 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF517Q6ZMY9 492 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC29A4Q7RTT9 530 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC39A11Q8N1S5 342 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF420Q8TAQ5 688 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 CDH7Q9ULB5 785 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 PLAGL1Q9UM63 463 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC22A14Q9Y267 594 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 LOC100130705A0A1B0GUX0 176 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 NPIPA2E9PIF3 369 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 NPIPA5E9PKD4 350 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 NPIPA3F8WFD2 350 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ERP29P30040 261 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ETV3P41162 512 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ELAVL3Q14576 367 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 SPIN4Q56A73 249 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF773Q6PK81 442 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 COMMD4Q9H0A8 199 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF358Q9NW07 568 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 NPIPA1Q9UND3 350 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 TYRP1P17643 537 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 SERPINF1P36955 418 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC15A1P46059 708 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 Q6ZVL8 140 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 TCEAL8Q8IYN2 117 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 KLHL36Q8N4N3 616 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 TSGA13Q96PP4 275 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZBTB26Q9HCK0 441 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 EPOP01588 193 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 REEP5Q00765 189 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 TARDBPQ13148 414 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 TIFABQ6ZNK6 161 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 CREB3L2Q70SY1 520 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 KCT2Q8NC54 265 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR10H4Q8NGA5 316 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPER1Q99527 375 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 CHIAQ9BZP6 476 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 HAPLN2Q9GZV7 340 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPR34Q9UPC5 381 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 CSNK2A2P19784 350 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ETV1P50549 477 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 COMTD1Q86VU5 262 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 UMODL1-AS1Q8N2C9 162 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 TRAM1L1Q8N609 369 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR9A1PQ8NGU1 263 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 LMO3Q8TAP4 145 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 CST11Q9H112 138 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 FBRSQ9HAH7 460 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 FKBP7Q9Y680 259 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 A8MT66 165 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM72CH0Y354 149 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 J3QRK9 145 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 HCN1O60741 890 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 VNN2O95498 520 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 CD72P21854 359 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 STC1P52823 247 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 PLGLB1Q02325 96 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM72AQ5TYM5 149 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 GTF2IRD2BQ6EKJ0 949 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC8B1Q6J4K2 584 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM72DQ6L9T8 149 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 GTF2IRD2Q86UP8 949 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM72BQ86X60 149 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms