RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OR8J1Q8NGP2 316 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 EXO5Q9H790 373 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 TAC3Q9UHF0 121 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 UQCRC2P22695 453 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 INHBCP55103 352 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 CAP1Q01518 475 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 MLLT1Q03111 559 aaPredicted RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 NFATC2Q13469 925 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 KCNC3Q14003 757 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 SCGB2B2Q4G0G5 96 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 HSD17B12Q53GQ0 312 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 HS3ST5Q8IZT8 346 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 OR2L5Q8NG80 312 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 GATAD2BQ8WXI9 593 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 FUBP1Q96AE4 644 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 PTERQ96BW5 349 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 S100A16Q96FQ6 103 aaKnown RBP15.35■□□□□ 0.05
COL17A1-202ENST00000369733 CD180Q99467 661 aa15.35■□□□□ 0.05
COL17A1-202ENST00000369733 LRP6O75581 1613 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 EPHX1P07099 455 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 MAP3K8P41279 467 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 ERVPABLB-1P60509 514 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 SPCS2Q15005 226 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 PROX2Q3B8N5 592 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF789Q5FWF6 425 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF648Q5T619 568 aaPredicted RBP15.34■□□□□ 0.05
COL17A1-202ENST00000369733 LIPJQ5W064 366 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 PSD4Q8NDX1 1056 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 OR51G2Q8NGK0 314 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 SLC5A11Q8WWX8 675 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 B3GNT4Q9C0J1 378 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 AGAP5A6NIR3 686 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 FLT3LGP49771 235 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 HTR6P50406 440 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 TSC22D1Q15714 1073 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 THAP6Q8TBB0 222 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 NUS1Q96E22 293 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 RBM18Q96H35 190 aaKnown RBP15.34■□□□□ 0.05
COL17A1-202ENST00000369733 TRIB3Q96RU7 358 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 IGFLR1Q9H665 355 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 GNG8Q9UK08 70 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 H7C2Y5 167 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 FLRT2O43155 660 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 ERI3O43414 337 aaKnown RBP15.34■□□□□ 0.05
COL17A1-202ENST00000369733 AGR2O95994 175 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 CTNNB1P35222 781 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 ARSIQ5FYB1 569 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 HMBOX1Q6NT76 420 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 TMIGD1Q6UXZ0 262 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 FAM217AQ8IXS0 508 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 DTX3Q8N9I9 347 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 PDLIM7Q9NR12 457 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 MEMO1Q9Y316 297 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 KEAP1Q14145 624 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 TRAM2Q15035 370 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 GPRC6AQ5T6X5 926 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 NLKQ9UBE8 527 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 PCDHGA8Q9Y5G5 932 aa15.34■□□□□ 0.05
COL17A1-202ENST00000369733 UPK3BL1B0FP48 263 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 UPK3BL2E5RIL1 263 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 RENP00797 406 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 RETP07949 1114 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 CA5AP35218 305 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 APLP1P51693 650 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 SLC25A25Q6KCM7 469 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 SLC27A4Q6P1M0 643 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 LILRA2Q8N149 483 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.33■□□□□ 0.05
COL17A1-202ENST00000369733 TOPAZ1Q8N9V7 1692 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 PCDH17O14917 1159 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 SMAD9O15198 467 aaKnown RBP15.33■□□□□ 0.05
COL17A1-202ENST00000369733 TOXO94900 526 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 LAG3P18627 525 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 IL4RP24394 825 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 FADDQ13158 208 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 PUM1Q14671 1186 aaKnown RBP eCLIP15.33■□□□□ 0.05
COL17A1-202ENST00000369733 C18orf21Q32NC0 220 aaPredicted RBP15.33■□□□□ 0.05
COL17A1-202ENST00000369733 PSRC1Q6PGN9 363 aaPredicted RBP15.33■□□□□ 0.05
COL17A1-202ENST00000369733 LARP4Q71RC2 724 aaKnown RBP eCLIP15.33■□□□□ 0.05
COL17A1-202ENST00000369733 TMED4Q7Z7H5 227 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 RPLP0P6Q8NHW5 317 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 NEK7Q8TDX7 302 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 NR4A3Q92570 626 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 HYLS1Q96M11 299 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 ABCG5Q9H222 651 aa15.33■□□□□ 0.05
COL17A1-202ENST00000369733 GPN2Q9H9Y4 310 aaPredicted RBP15.33■□□□□ 0.05
COL17A1-202ENST00000369733 MRPS14O60783 128 aaKnown RBP15.33■□□□□ 0.04
COL17A1-202ENST00000369733 EPCAMP16422 314 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 BMP8BP34820 402 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 VLDLRP98155 873 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 GTDC1Q4AE62 458 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 ULK3Q6PHR2 472 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 BMP8AQ7Z5Y6 402 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 LHFPL3Q86UP9 236 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 SCRN2Q96FV2 425 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 ADAD1Q96M93 576 aaKnown RBP15.33■□□□□ 0.04
COL17A1-202ENST00000369733 HCN3Q9P1Z3 774 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 RBM7Q9Y580 266 aaKnown RBP15.33■□□□□ 0.04
COL17A1-202ENST00000369733 PCDHB14Q9Y5E9 798 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 C5P01031 1676 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms