RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 GUCY1A3Q02108 690 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 ZNF33BQ06732 778 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 NR6A1Q15406 480 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 CYP20A1Q6UW02 462 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 LRRC69Q6ZNQ3 347 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 FAM47EQ6ZV65 393 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 TRIM46Q7Z4K8 759 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 CA13Q8N1Q1 262 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 METTL4Q8N3J2 472 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 OR2T11Q8NH01 316 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 STT3BQ8TCJ2 826 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 MIEF2Q96C03 454 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 PPT2Q9UMR5 302 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 MAP4K5Q9Y4K4 846 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 NUP210LQ5VU65 1888 aa13.14□□□□□ -0.31
TPM3-211ENST00000368531 ARHGAP10A1A4S6 786 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 OR2W5A6NFC9 320 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 TCP11X1B4DZS4 312 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 PSMD12O00232 456 aaPredicted RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 RGS14O43566 566 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 B4GALT2O60909 372 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 SEC22BO75396 215 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 SNUPNO95149 360 aaKnown RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 ONECUT2O95948 504 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 JUNP05412 331 aaKnown RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 RAB40ALP0C0E4 278 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 ZGLP1P0C6A0 271 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 PTPN4P29074 926 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 FOXK2Q01167 660 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 TBL3Q12788 808 aaKnown RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 NKG7Q16617 165 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 GALNTL6Q49A17 601 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 CCNYL2Q5T2Q4 361 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 FAAH2Q6GMR7 532 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 MRPL14Q6P1L8 145 aaKnown RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 RIPOR1Q6ZS17 1223 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 COMMD6Q7Z4G1 85 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 LAPTM4BQ86VI4 370 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 NUDT13Q86X67 352 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 PROSER1Q86XN7 944 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 CRLF3Q8IUI8 442 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 ZC3H7AQ8IWR0 971 aaKnown RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 SPACA3Q8IXA5 215 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 FAM47BQ8NA70 645 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 CHTF18Q8WVB6 975 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 FKBP10Q96AY3 582 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 C3orf30Q96M34 536 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 NUF2Q9BZD4 464 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 DPH1Q9BZG8 443 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 ROGDIQ9GZN7 287 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 ACTL8Q9H568 366 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 MKKSQ9NPJ1 570 aaPredicted RBP13.13□□□□□ -0.31
TPM3-211ENST00000368531 GIMAP2Q9UG22 337 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 PADI2Q9Y2J8 665 aa13.13□□□□□ -0.31
TPM3-211ENST00000368531 A0A0A6YYD5 115 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 SERTM1A2A2V5 107 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 C21orf140B9A014 251 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 TERTO14746 1132 aaKnown RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 TMPRSS11DO60235 418 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 PEX11AO75192 247 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 BMP10O95393 424 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 ALBP02768 609 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 RNH1P13489 461 aaKnown RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 WT1P19544 449 aaPredicted RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 CPN2P22792 545 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 ITPKBP27987 946 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 FOLR3P41439 243 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 LIM2P55344 173 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 HNRNPH2P55795 449 aaKnown RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 MINDY4Q4G0A6 757 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 Q6ZSR9 355 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 PAGE2Q7Z2X7 111 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 TBC1D20Q96BZ9 403 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 TUBGCP3Q96CW5 907 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 C19orf60Q96EN9 201 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 CCNL2Q96S94 520 aaPredicted RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 NPLQ9BXD5 320 aaPredicted RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 GPR87Q9BY21 358 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 LRTM1Q9HBL6 345 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 HAO1Q9UJM8 370 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 KCND3Q9UK17 655 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 TCFL5Q9UL49 500 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 MKL2Q9ULH7 1088 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 DAPP1Q9UN19 280 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 CCL27Q9Y4X3 112 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 POLR3HQ9Y535 204 aaPredicted RBP13.12□□□□□ -0.31
TPM3-211ENST00000368531 AKAP13Q12802 2813 aa13.12□□□□□ -0.31
TPM3-211ENST00000368531 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
TPM3-211ENST00000368531 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
TPM3-211ENST00000368531 VSTM2BA6NLU5 285 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms