RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 BTBD2Q9BX70 525 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FARSBQ9NSD9 589 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FAM86C1Q9NVL1 165 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FKBP7Q9Y680 259 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 NUP98P52948 1817 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 A0A0U1RQF3 1178 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OPN1SWP03999 348 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 RPLP0P05388 317 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CEBPBP17676 345 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PAX7P23759 505 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 HMGCS1Q01581 520 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 LMAN2Q12907 356 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 TMEM44Q2T9K0 475 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 TMEM31Q5JXX7 168 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 SPDYCQ5MJ68 293 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 C22orf39Q6P5X5 142 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ESPNLQ6ZVH7 1005 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 TRIM73Q86UV7 250 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CNEP1R1Q8N9A8 125 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OR7G2Q8NG99 324 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 DIRAS2Q96HU8 199 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 BTF3L4Q96K17 158 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 NPLQ9BXD5 320 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OR10A4Q9H209 315 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 LRMDAQ9H2I8 198 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 HEBP1Q9NRV9 189 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CNTN3Q9P232 1028 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 HSPB11Q9Y547 144 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 A0A1W2PRB8 838 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 KLRC4O43908 158 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ENTPD5O75356 428 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 LRCH4O75427 683 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 GADD45GO95257 159 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 VNN1O95497 513 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CSTBP04080 98 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OXTRP30559 389 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 GRIA1P42261 906 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 RPS9P46781 194 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 RIDAP52758 137 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ASTE1Q2TB18 679 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PDE12Q6L8Q7 609 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FAM180BQ6P0A1 224 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 NFKBIDQ8NI38 313 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 GFM1Q96RP9 751 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 HAPLN3Q96S86 360 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 LGR4Q9BXB1 951 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 MRM3Q9HC36 420 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 SLC2A6Q9UGQ3 507 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CORO1CQ9ULV4 474 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 SIGLEC1Q9BZZ2 1709 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ZNF318Q5VUA4 2279 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 H7BY64 318 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CIDEAO60543 219 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OR2B3O76000 313 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 NADKO95544 446 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 SEMA4FO95754 770 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OPN1LWP04000 364 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 DCNP07585 359 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PRKCAP17252 672 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 MAPK3P27361 379 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ADH6P28332 368 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 SOX9P48436 509 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OR12D2P58182 307 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PPP2CAP67775 309 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PAMR1Q6UXH9 720 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OSTM1Q86WC4 334 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PRR18Q8N4B5 295 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CPSF7Q8N684 471 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ZNF565Q8N9K5 539 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ZNF516Q92618 1163 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PRAP1Q96NZ9 151 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ASPNQ9BXN1 380 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 TMEM100Q9NV29 134 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ZNF226Q9NYT6 803 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 CAMK2AQ9UQM7 478 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 MPDZO75970 2070 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 MON2Q7Z3U7 1717 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ELOVL7A1L3X0 281 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 TTLL8A6PVC2 850 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ERCC1P07992 297 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 GABRA3P34903 492 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 SERPINF1P36955 418 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FASLGP48023 281 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 YBEYP58557 167 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 TMEM115Q12893 351 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FGL2Q14314 439 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 LYSMD4Q5XG99 296 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 LIX1LQ8IVB5 337 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 C12orf43Q96C57 262 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FEM1AQ9BSK4 669 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 OR51B5Q9H339 312 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 LRRC4CQ9HCJ2 640 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 PCDHB16Q9NRJ7 776 aa6.83□□□□□ -1.32
SPTA1-201ENST00000368147 ZFR2Q9UPR6 939 aaKnown RBP6.83□□□□□ -1.32
SPTA1-201ENST00000368147 HAS3O00219 553 aa6.82□□□□□ -1.32
SPTA1-201ENST00000368147 C2P06681 752 aa6.82□□□□□ -1.32
SPTA1-201ENST00000368147 L1CAMP32004 1257 aa6.82□□□□□ -1.32
SPTA1-201ENST00000368147 UGT2B10P36537 528 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms