RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 KLHL38Q2WGJ6 581 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 ACSBG2Q5FVE4 666 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 C20orf204Q6ZNR8 217 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 LRRC6Q86X45 466 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 IGFBPL1Q8WX77 278 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 SREK1Q8WXA9 508 aaKnown RBP13.49□□□□□ -0.25
VAMP4-202ENST00000367740 BIRC8Q96P09 236 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 USF3Q68DE3 2245 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 CASKO14936 926 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 CD3EAPO15446 510 aaKnown RBP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 PJA2O43164 708 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 ZNF354AO60765 605 aaPredicted RBP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 OPRM1P35372 400 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 TRPC1P48995 793 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 HK2P52789 917 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 ADARP55265 1226 aaKnown RBP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 TBPL1P62380 186 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 RUNX1T1Q06455 604 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 CRYZQ08257 329 aaKnown RBP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 CDH17Q12864 832 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 RPS6KA1Q15418 735 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 CHRFAM7AQ494W8 412 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 NSUN5P2Q63ZY6 315 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 ADGRD1Q6QNK2 874 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 MEIOBQ8N635 442 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 KRT35Q92764 455 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 C19orf24Q9BVV8 132 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 ACKR4Q9NPB9 350 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 PNO1Q9NRX1 252 aaKnown RBP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 SPTLC3Q9NUV7 552 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 GALPQ9UBC7 116 aa13.48□□□□□ -0.25
VAMP4-202ENST00000367740 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.48□□□□□ -0.25
VAMP4-202ENST00000367740 MBD3L3A6NE82 208 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-202ENST00000367740 LRRC3CA6NJW4 275 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 RNF223E7ERA6 249 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 TGFBR3LH3BV60 316 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 NDUFS4O43181 175 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 CEP104O60308 925 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 SYF2O95926 243 aaKnown RBP13.47□□□□□ -0.25
VAMP4-202ENST00000367740 IL18BPO95998 194 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 P04436 131 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 ZNF888P0CJ79 500 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-202ENST00000367740 PAX1P15863 534 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 PIGAP37287 484 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 SKP1P63208 163 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 HECTD2Q5U5R9 776 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 LUZP2Q86TE4 346 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 LINC00523Q86TU6 105 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 LRRC25Q8N386 305 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-202ENST00000367740 MFSD9Q8NBP5 474 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 MBD3L2Q8NHZ7 208 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-202ENST00000367740 SGCZQ96LD1 299 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 ANP32EQ9BTT0 268 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 PRDM14Q9GZV8 571 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 CCDC177Q9NQR7 707 aaPredicted RBP13.47□□□□□ -0.25
VAMP4-202ENST00000367740 TCAF1Q9Y4C2 921 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 CLDN16Q9Y5I7 305 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 GTF3C3Q9Y5Q9 886 aa13.47□□□□□ -0.25
VAMP4-202ENST00000367740 C15orf38-AP3S2A0A0A6YYH1 394 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 CTIFO43310 598 aaKnown RBP13.46□□□□□ -0.25
VAMP4-202ENST00000367740 CD5LO43866 347 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 NDUFS3O75489 264 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 SIX3O95343 332 aaPredicted RBP13.46□□□□□ -0.25
VAMP4-202ENST00000367740 TP53P04637 393 aaPredicted RBP13.46□□□□□ -0.25
VAMP4-202ENST00000367740 FAM157CP0CG43 387 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 RNH1P13489 461 aaKnown RBP13.46□□□□□ -0.25
VAMP4-202ENST00000367740 ADRA1DP25100 572 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 P3H1Q32P28 736 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 RNF187Q5TA31 235 aaPredicted RBP13.46□□□□□ -0.25
VAMP4-202ENST00000367740 NIPAL1Q6NVV3 410 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 LIX1Q8N485 282 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 FAM71DQ8N9W8 422 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 NTNG2Q96CW9 530 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 PIK3IP1Q96FE7 263 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 PIGQQ9BRB3 760 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 RHBGQ9H310 441 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 YAE1D1Q9NRH1 226 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 MMACHCQ9Y4U1 282 aa13.46□□□□□ -0.25
VAMP4-202ENST00000367740 TGP01266 2768 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 NINQ8N4C6 2090 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 CD8B2A6NJW9 211 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 PSMD12O00232 456 aaPredicted RBP13.45□□□□□ -0.26
VAMP4-202ENST00000367740 PSMD3O43242 534 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 ERN1O75460 977 aaKnown RBP13.45□□□□□ -0.26
VAMP4-202ENST00000367740 SERPINC1P01008 464 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 FMO4P31512 558 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 GRIA1P42261 906 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 SKIV2L2P42285 1042 aaKnown RBP13.45□□□□□ -0.26
VAMP4-202ENST00000367740 CPA2P48052 419 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 GDF10P55107 478 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 FOXF2Q12947 444 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 DUSP8Q13202 625 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 TCEAL1Q15170 157 aa13.45□□□□□ -0.26
VAMP4-202ENST00000367740 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.45□□□□□ -0.26
VAMP4-202ENST00000367740 MPP5Q8N3R9 675 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms