RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ANKRD49Q8WVL7 239 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 MS4A6EQ96DS6 147 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 PTCD3Q96EY7 689 aaKnown RBP13.86□□□□□ -0.19
CTSD-202ENST00000367196 PDLIM2Q96JY6 352 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 SERINC2Q96SA4 455 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 MCMBPQ9BTE3 642 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 EFCAB11Q9BUY7 163 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 UNKQ9C0B0 810 aaKnown RBP13.86□□□□□ -0.19
CTSD-202ENST00000367196 ROGDIQ9GZN7 287 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 REXO4Q9GZR2 422 aaKnown RBP13.86□□□□□ -0.19
CTSD-202ENST00000367196 TSPAN10Q9H1Z9 355 aaPredicted RBP13.86□□□□□ -0.19
CTSD-202ENST00000367196 ADAP2Q9NPF8 381 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 NECTIN3Q9NQS3 549 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 PRTFDC1Q9NRG1 225 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 WHRNQ9P202 907 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 SNX24Q9Y343 169 aa13.86□□□□□ -0.19
CTSD-202ENST00000367196 CTAGE15A4D2H0 777 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 A8MUA0 341 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 TP73O15350 636 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 STK16O75716 305 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 GSTA2P09210 222 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 CCDC166P0CW27 439 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 TFEBP19484 476 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 HNRNPH1P31943 449 aaKnown RBP13.85□□□□□ -0.19
CTSD-202ENST00000367196 GP5P40197 560 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 GDF5P43026 501 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 MTTPP55157 894 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 EFTUD2Q15029 972 aaKnown RBP eCLIP13.85□□□□□ -0.198e-7■■■□□ 18.9
CTSD-202ENST00000367196 PDK4Q16654 411 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 ADPRMQ3LIE5 342 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 XKR6Q5GH73 641 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 CYS1Q717R9 158 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 CTAGE6Q86UF2 777 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 GPALPP1Q8IXQ4 340 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 CPSF7Q8N684 471 aaKnown RBP13.85□□□□□ -0.19
CTSD-202ENST00000367196 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 APCDD1LQ8NCL9 501 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 PHF10Q8WUB8 498 aaKnown RBP13.85□□□□□ -0.19
CTSD-202ENST00000367196 GPR22Q99680 433 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 RBBP8Q99708 897 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 PHACTR1Q9C0D0 580 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 PRM3Q9NNZ6 103 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 TIMMDC1Q9NPL8 285 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 PNO1Q9NRX1 252 aaKnown RBP13.85□□□□□ -0.19
CTSD-202ENST00000367196 CD274Q9NZQ7 290 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 FBXW2Q9UKT8 454 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 PPIEQ9UNP9 301 aaKnown RBP13.85□□□□□ -0.19
CTSD-202ENST00000367196 MEMO1Q9Y316 297 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 SPACA6W5XKT8 324 aa13.85□□□□□ -0.19
CTSD-202ENST00000367196 NCOA6Q14686 2063 aaPredicted RBP13.85□□□□□ -0.19
CTSD-202ENST00000367196 C4orf51C9J302 202 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 E9PLN8 166 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 ITGA10O75578 1167 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 CLDN14O95500 239 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 CD1DP15813 335 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 SPRP35270 261 aaPredicted RBP13.84□□□□□ -0.19
CTSD-202ENST00000367196 KCNC1P48547 511 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 MEOX1P50221 254 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 SSR4P51571 173 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 PLA2G16P53816 162 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 ELAVL1Q15717 326 aaKnown RBP13.84□□□□□ -0.19
CTSD-202ENST00000367196 ZNF468Q5VIY5 522 aaPredicted RBP13.84□□□□□ -0.19
CTSD-202ENST00000367196 LRRC70Q7Z2Q7 622 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 TMEM132CQ8N3T6 1108 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 PDPRQ8NCN5 879 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 DAZLQ92904 295 aaKnown RBP13.84□□□□□ -0.19
CTSD-202ENST00000367196 UBE2E3Q969T4 207 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 NCLNQ969V3 563 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 KIAA1191Q96A73 305 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 KCNC2Q96PR1 638 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 VKORC1Q9BQB6 163 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 ERP44Q9BS26 406 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 TMEM79Q9BSE2 394 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 SAYSD1Q9NPB0 183 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 RNF112Q9ULX5 631 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 DAPP1Q9UN19 280 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 MTO1Q9Y2Z2 717 aaKnown RBP13.84□□□□□ -0.19
CTSD-202ENST00000367196 YARS2Q9Y2Z4 477 aaKnown RBP13.84□□□□□ -0.19
CTSD-202ENST00000367196 CLCA3PQ9Y6N3 262 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 GTF3C1Q12789 2109 aa13.84□□□□□ -0.19
CTSD-202ENST00000367196 PKDREJQ9NTG1 2253 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 CSMD1Q96PZ7 3565 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 A0A0G2JN53 185 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 TCRBV9S1A1TA0A576 114 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 A8MVJ9 347 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 ZFAND5O76080 213 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 WISP3O95389 354 aaPredicted RBP13.83□□□□□ -0.2
CTSD-202ENST00000367196 TUBB4AP04350 444 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 PRF1P14222 555 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 GRNP28799 593 aaKnown RBP13.83□□□□□ -0.2
CTSD-202ENST00000367196 SERPINB1P30740 379 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 SSTR1P30872 391 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 HSPA7P48741 367 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 ST13P50502 369 aaKnown RBP13.83□□□□□ -0.2
CTSD-202ENST00000367196 LIM2P55344 173 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 RAB10P61026 200 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 ADORA2A-AS1P86434 159 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 IRF8Q02556 426 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms