RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 BTNL2Q9UIR0 455 aa14.12□□□□□ -0.15
PRKN-204ENST00000366896 RUVBL1Q9Y265 456 aaKnown RBP14.12□□□□□ -0.15
PRKN-204ENST00000366896 SAMHD1Q9Y3Z3 626 aaKnown RBP14.12□□□□□ -0.15
PRKN-204ENST00000366896 PCDHB11Q9Y5F2 797 aa14.12□□□□□ -0.15
PRKN-204ENST00000366896 PCDHGA6Q9Y5G7 932 aa14.12□□□□□ -0.15
PRKN-204ENST00000366896 NUP210Q8TEM1 1887 aaPredicted RBP14.12□□□□□ -0.15
PRKN-204ENST00000366896 LOC100506127A0A0U1RQW1 187 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 CENPXA8MT69 81 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 YY2O15391 372 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 CAMK2GQ13555 558 aaPredicted RBP14.11□□□□□ -0.15
PRKN-204ENST00000366896 GPR50Q13585 617 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 SOWAHCQ53LP3 525 aaPredicted RBP14.11□□□□□ -0.15
PRKN-204ENST00000366896 NXNL2Q5VZ03 156 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 SERPINA13PQ6UXR4 307 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 NPAS3Q8IXF0 933 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 KLHDC8AQ8IYD2 350 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 CDC26Q8NHZ8 85 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 MYDGFQ969H8 173 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 MSLNLQ96KJ4 702 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 C7orf34Q96L11 122 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 BBS2Q9BXC9 721 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 ATG10Q9H0Y0 220 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 SPATA6Q9NWH7 488 aaPredicted RBP14.11□□□□□ -0.15
PRKN-204ENST00000366896 FKBP14Q9NWM8 211 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 TMPRSS11EQ9UL52 423 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 PADI2Q9Y2J8 665 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 NUP214P35658 2090 aaPredicted RBP14.11□□□□□ -0.15
PRKN-204ENST00000366896 H3BQ06 376 aaPredicted RBP14.11□□□□□ -0.15
PRKN-204ENST00000366896 MTX2O75431 263 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 DNTTP04053 509 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 CDK1P06493 297 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 PIK3CBP42338 1070 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 SLC15A1P46059 708 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 PTSQ03393 145 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 LRRC74AQ0VAA2 488 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 STARD3Q14849 445 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 FBXO43Q4G163 708 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 BCL7AQ4VC05 210 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 ATAT1Q5SQI0 421 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 ZNF621Q6ZSS3 439 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 SYT12Q8IV01 421 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 FIBINQ8TAL6 211 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 ZNF675Q8TD23 568 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 ASIC4Q96FT7 647 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 Q96MT0 163 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 DEPDC7Q96QD5 511 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 CENPOQ9BU64 300 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 CPEB1Q9BZB8 566 aaKnown RBP14.11□□□□□ -0.15
PRKN-204ENST00000366896 CHST8Q9H2A9 424 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 TDP1Q9NUW8 608 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 THUMPD1Q9NXG2 353 aaKnown RBP14.11□□□□□ -0.15
PRKN-204ENST00000366896 CD84Q9UIB8 345 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 TBC1D24Q9ULP9 559 aa14.11□□□□□ -0.15
PRKN-204ENST00000366896 A0A1W2PQ67 120 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 SEMA3DO95025 777 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 CPSF4O95639 269 aaKnown RBP14.1□□□□□ -0.15
PRKN-204ENST00000366896 CD22P20273 847 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 SNRPD1P62314 119 aaKnown RBP14.1□□□□□ -0.15
PRKN-204ENST00000366896 SMUG1Q53HV7 270 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 MFSD4BQ5TF39 518 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 HTR3DQ70Z44 454 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 Q7L0L9 218 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 GET4Q7L5D6 327 aaPredicted RBP14.1□□□□□ -0.15
PRKN-204ENST00000366896 GALNT12Q8IXK2 581 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 DNAJC22Q8N4W6 341 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 WDR20Q8TBZ3 569 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 FGF13Q92913 245 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 VPS29Q9UBQ0 182 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 LSM7Q9UK45 103 aaKnown RBP14.1□□□□□ -0.15
PRKN-204ENST00000366896 TRAPPC4Q9Y296 219 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 PCDHGB3Q9Y5G1 929 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 AP3D1O14617 1153 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 NUDT7P0C024 238 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 PTX3P26022 381 aaPredicted RBP14.1□□□□□ -0.15
PRKN-204ENST00000366896 WEE1P30291 646 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 CHIT1Q13231 466 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 ELOAQ14241 798 aaKnown RBP14.1□□□□□ -0.15
PRKN-204ENST00000366896 RASSF5Q8WWW0 418 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 MYLIPQ8WY64 445 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 GGHQ92820 318 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 TMEM246Q9BRR3 403 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 BRF2Q9HAW0 419 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 C14orf119Q9NWQ9 140 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 ADPRHL2Q9NX46 363 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 BTBD3Q9Y2F9 522 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 MAU2Q9Y6X3 613 aa14.1□□□□□ -0.15
PRKN-204ENST00000366896 CLCA1A8K7I4 914 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 A8MVJ9 347 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 COX7A2P14406 83 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 ASMTP46597 345 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 CRYBA2P53672 197 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 PFN3P60673 137 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 CCDC58Q4VC31 144 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 MPPE1Q53F39 396 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 GPR153Q6NV75 609 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 VN1R5Q7Z5H4 357 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 NRARPQ7Z6K4 114 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 BBS7Q8IWZ6 715 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 SETD6Q8TBK2 473 aa14.09□□□□□ -0.15
PRKN-204ENST00000366896 TMCO6Q96DC7 493 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms