RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 RBM23Q86U06 439 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC15A3Q8IY34 581 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 IRF7Q92985 503 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 KANTRA0A1W2PQU2 76 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 HK1P19367 917 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 TICAM1Q8IUC6 712 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR4K14Q8NGD5 310 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 NXPE2Q96DL1 559 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 KCNS3Q9BQ31 491 aa11.6□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC31A1O15431 190 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 CD40LGP29965 261 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 EML3Q32P44 896 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 UNC50Q53HI1 259 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TXNDC8Q6A555 127 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 STX12Q86Y82 276 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 KCNN1Q92952 543 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 FAM129BQ96TA1 746 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TM9SF2Q99805 663 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 KIAA1551Q9HCM1 1747 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 DOCK1Q14185 1865 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ETV4P43268 484 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TMEM115Q12893 351 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 PPP1R13LQ8WUF5 828 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 NKIRAS2Q9NYR9 191 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 CYTH4Q9UIA0 394 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TRIP12Q14669 1992 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ADAP00813 363 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF182P17025 639 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 GGT1P19440 569 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 THOC7Q6I9Y2 204 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TMEM234Q8WY98 164 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 GAS2L1Q99501 681 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ARNT2Q9HBZ2 717 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 FBXL12Q9NXK8 326 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 PLEKHA6Q9Y2H5 1048 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 PTPRZ1P23471 2315 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 CPSF4LA6NMK7 179 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 GRID2O43424 1007 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 SNTA1Q13424 505 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 MPP7Q5T2T1 576 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ASB18Q6ZVZ8 466 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZBTB46Q86UZ6 589 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 BPIFB1Q8TDL5 484 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 GAL3ST4Q96RP7 486 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 MBLAC1A4D2B0 266 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TLX2O43763 284 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF423Q2M1K9 1284 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 SHKBP1Q8TBC3 707 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ISG20Q96AZ6 181 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 LSM1O15116 133 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 RPS13P62277 151 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TSTQ16762 297 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 CMTR2Q8IYT2 770 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 CHFRQ96EP1 664 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 MYRFLQ96LU7 910 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 CPNE5Q9HCH3 593 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TBC1D24Q9ULP9 559 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 WASH4PA8MWX3 477 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TMEM189-UBE2V1I3L0A0 370 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 DNAJB6O75190 326 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ACP5P13686 325 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 NCEH1Q6PIU2 408 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 FANK1Q8TC84 345 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF675Q8TD23 568 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 BRD7Q9NPI1 651 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 KDELR2P33947 212 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 RYKP34925 604 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 VEZF1Q14119 521 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 B3GAT2Q9NPZ5 323 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 PAK1IP1Q9NWT1 392 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 OSER1Q9NX31 292 aa11.59□□□□□ -0.55
CDC42BPA-203ENST00000366766 TOR1BO14657 336 aa11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 C1GALT1C1LP0DN25 315 aa11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 RPS15AP62244 130 aaKnown RBP11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 TLR1Q15399 786 aa11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 BTN2A1Q7KYR7 527 aa11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 TMEM74Q96NL1 305 aa11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 TMA7Q9Y2S6 64 aaKnown RBP11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF840PA6NDX5 716 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 FLRT2O43155 660 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ARHGAP19Q14CB8 494 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 GKN2Q86XP6 184 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 NRROSQ86YC3 692 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 HS3ST5Q8IZT8 346 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ZNF726A6NNF4 738 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 WASHC1A8K0Z3 465 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 WASH3PC4AMC7 463 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 JUNP05412 331 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC11A1P49279 550 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 PHC1P78364 1004 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 WASH2PQ6VEQ5 465 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 RDH14Q9HBH5 336 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 A0A1W2PRQ8 180 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 C1orf226A1L170 272 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC22A31A6NKX4 558 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms