RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 DACT3Q96B18 629 aaPredicted RBP18.84■□□□□ 0.61
TRIM58-201ENST00000366481 PITX2Q99697 317 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 KLF16Q9BXK1 252 aaPredicted RBP18.84■□□□□ 0.61
TRIM58-201ENST00000366481 SERHLQ9NQF3 203 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 TMEM184CQ9NVA4 438 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 YIPF1Q9Y548 306 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 SNTNA6NMZ2 147 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 CDK2AP1O14519 115 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 PRAMEF4O60810 478 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 ZNF79Q15937 498 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 CDONQ4KMG0 1287 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 PRAMEF9Q5VWM5 478 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRIM58-201ENST00000366481 TAGAPQ8N103 731 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 DTX3Q8N9I9 347 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 COPS8Q99627 209 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 ACAT2Q9BWD1 397 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 C11orf16Q9NQ32 467 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 COMMD3Q9UBI1 195 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 SSR3Q9UNL2 185 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 CHD5Q8TDI0 1954 aa18.84■□□□□ 0.61
TRIM58-201ENST00000366481 PSIP1O75475 530 aaKnown RBP18.83■□□□□ 0.61
TRIM58-201ENST00000366481 CYP17A1P05093 508 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 CKMP06732 381 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 SLC9A3P48764 834 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 ITGA1P56199 1179 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 ALDH6A1Q02252 535 aaKnown RBP18.83■□□□□ 0.61
TRIM58-201ENST00000366481 GANABQ14697 944 aaKnown RBP18.83■□□□□ 0.61
TRIM58-201ENST00000366481 LIPKQ5VXJ0 399 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 ANKK1Q8NFD2 765 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 SCAMP4Q969E2 229 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 BARHL1Q9BZE3 327 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 POLR2J2Q9GZM3 115 aaKnown RBP18.83■□□□□ 0.61
TRIM58-201ENST00000366481 ZNF334Q9HCZ1 680 aaPredicted RBP18.83■□□□□ 0.61
TRIM58-201ENST00000366481 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.83■□□□□ 0.61
TRIM58-201ENST00000366481 H7C0S8 307 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 KCNK5O95279 499 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 PRIM2P49643 509 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 ESCO2Q56NI9 601 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 TRIM69Q86WT6 500 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 SIGLEC11Q96RL6 698 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 C3orf14Q9HBI5 128 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 ZC4H2Q9NQZ6 224 aa18.83■□□□□ 0.61
TRIM58-201ENST00000366481 MYOFQ9NZM1 2061 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 PCP4L1A6NKN8 68 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 OR2AG2A6NM03 316 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 NRG2O14511 850 aaPredicted RBP18.83■□□□□ 0.6
TRIM58-201ENST00000366481 INHAP05111 366 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 SDC1P18827 310 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 KIR2DL3P43628 341 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 HYAL2Q12891 473 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 IQCCQ4KMZ1 466 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 FAHD1Q6P587 224 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 RNF130Q86XS8 419 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 PLD4Q96BZ4 506 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 MSANTD3Q96H12 275 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 CAPNS2Q96L46 248 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 SRRQ9GZT4 340 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 MCUBQ9NWR8 336 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 ZNF226Q9NYT6 803 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 RHCGQ9UBD6 479 aa18.83■□□□□ 0.6
TRIM58-201ENST00000366481 PLOD3O60568 738 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 CCNB2O95067 398 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 GBAP04062 536 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 ANXA5P08758 320 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 SELPP16109 830 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 CRATP43155 626 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 CLDN8P56748 225 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 WSCD2Q2TBF2 565 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 FAM205BPQ63HN1 556 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 VN1R5Q7Z5H4 357 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 BBS7Q8IWZ6 715 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 NXPE1Q8N323 547 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 POP5Q969H6 163 aaKnown RBP18.82■□□□□ 0.6
TRIM58-201ENST00000366481 ZDHHC6Q9H6R6 413 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 V9GYH0 126 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 RPLP2P05387 115 aaKnown RBP18.82■□□□□ 0.6
TRIM58-201ENST00000366481 GPC1P35052 558 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 GZMMP51124 257 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 B4GALNT1Q00973 533 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRIM58-201ENST00000366481 GPR19Q15760 415 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 EXOC3L2Q2M3D2 409 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 LCN1P1Q5VSP4 162 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 ZNF57Q68EA5 555 aaPredicted RBP18.82■□□□□ 0.6
TRIM58-201ENST00000366481 FAM180BQ6P0A1 224 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 CERS6Q6ZMG9 384 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 ZNF224Q9NZL3 707 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 CLEC2DQ9UHP7 191 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 ALG5Q9Y673 324 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 DOCK6Q96HP0 2047 aa18.82■□□□□ 0.6
TRIM58-201ENST00000366481 TRBV5-3A0A0A0MS03 114 aa18.81■□□□□ 0.6
TRIM58-201ENST00000366481 A8MUA0 341 aa18.81■□□□□ 0.6
TRIM58-201ENST00000366481 CLEC2LP0C7M8 214 aa18.81■□□□□ 0.6
TRIM58-201ENST00000366481 FEN1P39748 380 aaKnown RBP18.81■□□□□ 0.6
TRIM58-201ENST00000366481 GZMKP49863 264 aa18.81■□□□□ 0.6
TRIM58-201ENST00000366481 CHST9Q7L1S5 443 aa18.81■□□□□ 0.6
TRIM58-201ENST00000366481 CMTM8Q8IZV2 173 aa18.81■□□□□ 0.6
TRIM58-201ENST00000366481 LILRA3Q8N6C8 439 aaPredicted RBP18.81■□□□□ 0.6
TRIM58-201ENST00000366481 LSMEM1Q8N8F7 131 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms