RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 LMBRD1Q9NUN5 540 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 C6orf203Q9P0P8 240 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZFATQ9P243 1243 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZNF629Q9UEG4 869 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 MTRF1LQ9UGC7 380 aaKnown RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 PPIEQ9UNP9 301 aaKnown RBP7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 PCDHA3Q9Y5H8 950 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 SLC22A7Q9Y694 548 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 NCKAP5O14513 1909 aa7.82□□□□□ -1.16
HMGB1P39-201ENST00000366304 MACROD2A1Z1Q3 448 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 SH3D21A4FU49 640 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 LRRC3CA6NJW4 275 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 A8MVJ9 347 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 FAM47E-STBD1D6RA91 191 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 WWP2O00308 870 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 SPOPO43791 374 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 KIF5CO60282 957 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 HCN1O60741 890 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 CCNDBP1O95273 360 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 GABRA1P14867 456 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 BMP7P18075 431 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 IL10P22301 178 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 LOXP28300 417 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 IMPA1P29218 277 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 SOX18P35713 384 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 TRPC1P48995 793 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 PTH2RP49190 550 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 HNRNPFP52597 415 aaKnown RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 EIF3BP55884 814 aaKnown RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 RPS15AP62244 130 aaKnown RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 FOXF2Q12947 444 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 SLC10A1Q14973 349 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 ACKR1Q16570 336 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 PARP6Q2NL67 630 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 KLHL38Q2WGJ6 581 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 FASTKD1Q53R41 847 aaKnown RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 CATSPEREQ5SY80 951 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 HEPHL1Q6MZM0 1159 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 SASS6Q6UVJ0 657 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 ABHD13Q7L211 337 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 MAATS1Q7Z4T9 603 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 KIF18BQ86Y91 864 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 HIPK1Q86Z02 1210 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 RCOR2Q8IZ40 523 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 FAM71DQ8N9W8 422 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 TMEM52Q8NDY8 209 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 GIMAP7Q8NHV1 300 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 GSDMBQ8TAX9 411 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 SLC13A3Q8WWT9 602 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 PIGTQ969N2 578 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 PDLIM2Q96JY6 352 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 DACH2Q96NX9 599 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 ALS2CR12Q96Q35 445 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 CCL19Q99731 98 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 AICDAQ9GZX7 198 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 LDAHQ9H6V9 325 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZNF703Q9H7S9 590 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 TMEM184CQ9NVA4 438 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 HPF1Q9NWY4 346 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 GALNT8Q9NY28 637 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 CHMP5Q9NZZ3 219 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 MYOTQ9UBF9 498 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 FOXD3Q9UJU5 478 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 YARS2Q9Y2Z4 477 aaKnown RBP7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 ATG4BQ9Y4P1 393 aa7.81□□□□□ -1.16
HMGB1P39-201ENST00000366304 ARHGAP21Q5T5U3 1957 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 MYOCOSA0A1B0GUC4 107 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 EEF1E1-BLOC1S5C9J1V9 151 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 CD3EAPO15446 510 aaKnown RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 PJA2O43164 708 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 EEF1E1O43324 174 aaKnown RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 GOSR1O95249 250 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZNF888P0CJ79 500 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 RPS3P23396 243 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 CTNNA2P26232 953 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 ARNTP27540 789 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 ATP5DP30049 168 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 FMO4P31512 558 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 TIMP3P35625 211 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 CLCN2P51788 898 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 PSMA6P60900 246 aaKnown RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 MEF2AQ02078 507 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 DMTNQ08495 405 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 TCEAL1Q15170 157 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 RPS6KA1Q15418 735 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 DCST1Q5T197 706 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 CAPN13Q6MZZ7 669 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 PLXDC2Q6UX71 529 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 GK5Q6ZS86 529 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 FAM47EQ6ZV65 393 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 REXO1L1PQ8IX06 675 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 FBXW8Q8N3Y1 598 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 MFSD9Q8NBP5 474 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 CAMKVQ8NCB2 501 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 MAGEC3Q8TD91 643 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 ASB15Q8WXK1 588 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 LPGAT1Q92604 370 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 MARK4Q96L34 752 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 FOPNLQ96NB1 174 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 CHP1Q99653 195 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms