RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RFTN2Q52LD8 501 aaPredicted RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 KRT39Q6A163 491 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 NAA16Q6N069 864 aaPredicted RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 C15orf52Q6ZUT6 534 aaKnown RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 ANKRD33Q7Z3H0 272 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 TRMT11Q7Z4G4 463 aaKnown RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 KBTBD6Q86V97 674 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 TTC30BQ8N4P2 665 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 MINDY1Q8N5J2 469 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 SAMD12Q8N8I0 201 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 ZNRF1Q8ND25 227 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 NXNL1Q96CM4 212 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 VSIG2Q96IQ7 327 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 CASD1Q96PB1 797 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 OR5M11Q96RB7 305 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 TEX12Q9BXU0 123 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 RIMS4Q9H426 269 aaPredicted RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 IKZF5Q9H5V7 419 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 ANKZF1Q9H8Y5 726 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 ZNF702PQ9H963 129 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 C3orf14Q9HBI5 128 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 ZNF331Q9NQX6 463 aaPredicted RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 ABCC13Q9NSE7 274 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 SEPT11Q9NVA2 429 aaKnown RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 CRNNQ9UBG3 495 aaPredicted RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 NEU3Q9UQ49 428 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 RNF24Q9Y225 148 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 COLEC10Q9Y6Z7 277 aa0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 COL5A1P20908 1838 aaPredicted RBP0.98□□□□□ -2.25
RNU6-238P-201ENST00000363313 SAP18O00422 153 aaKnown RBP0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 GJB5O95377 273 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 MYL6BP14649 208 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 DNASE1P24855 282 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 PPP2R1AP30153 589 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 DUTP33316 252 aaKnown RBP0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 HSD17B3P37058 310 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 UBXN2AP68543 259 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 CNPY1Q3B7I2 92 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 ARMCX4Q5H9R4 360 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 C6orf136Q5SQH8 315 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 FUT10Q6P4F1 479 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 ABRAXAS1Q6UWZ7 409 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 ZNF786Q8N393 782 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 TTC39CQ8N584 583 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 ZNF433Q8N7K0 673 aaPredicted RBP0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 ZNF491Q8N8L2 437 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 XXYLT1Q8NBI6 393 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 CFAP61Q8NHU2 1237 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 HDAC11Q96DB2 347 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 CPNE1Q99829 537 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 FTOQ9C0B1 505 aaKnown RBP eCLIP0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 NOL11Q9H8H0 719 aaKnown RBP0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 DNAJC4Q9NNZ3 241 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 HPS4Q9NQG7 708 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 SH3GLB2Q9NR46 395 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 EIF2B3Q9NR50 452 aaKnown RBP0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 IARS2Q9NSE4 1012 aaKnown RBP0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 SLC24A2Q9UI40 661 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 AGTPBP1Q9UPW5 1226 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 SATB2Q9UPW6 733 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 SLIT3O75094 1523 aa0.97□□□□□ -2.25
RNU6-238P-201ENST00000363313 B4E171 279 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 PTGES3LE9PB15 166 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 MCF2LO15068 1137 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 RECQL5O94762 991 aaPredicted RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 MT-ND2P03891 347 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 SNRPCP09234 159 aaKnown RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 DLATP10515 647 aaKnown RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 TOP1P11387 765 aaKnown RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 PSMB1P20618 241 aaKnown RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 EEF1B2P24534 225 aaKnown RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 MAN1A1P33908 653 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 TSPAN7P41732 249 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 OR3A3P47888 321 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 NT5C2P49902 561 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 STAT2P52630 851 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 EVCP57679 992 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 RPS27AP62979 156 aaKnown RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 GTF3C1Q12789 2109 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 PCLAFQ15004 111 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 TTC27Q6P3X3 843 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 DET1Q7L5Y6 550 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 PLPPR4Q7Z2D5 763 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 COX8CQ7Z4L0 72 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 TMEM61Q8N0U2 210 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 NAXEQ8NCW5 288 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 IL22RA2Q969J5 263 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 MPP4Q96JB8 637 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 LRRC3BQ96PB8 259 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 CCSER1Q9C0I3 900 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 LIME1Q9H400 295 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 NANOGQ9H9S0 305 aa0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 DBF4Q9UBU7 674 aaPredicted RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 APOBEC3BQ9UH17 382 aaKnown RBP0.96□□□□□ -2.26
RNU6-238P-201ENST00000363313 A0A0U1RQK1 487 aa0.95□□□□□ -2.26
RNU6-238P-201ENST00000363313 CCDC189A1A4V9 331 aa0.95□□□□□ -2.26
RNU6-238P-201ENST00000363313 PI4KAP2A4QPH2 592 aa0.95□□□□□ -2.26
RNU6-238P-201ENST00000363313 A8MX80 341 aa0.95□□□□□ -2.26
RNU6-238P-201ENST00000363313 TRIM77I1YAP6 450 aa0.95□□□□□ -2.26
RNU6-238P-201ENST00000363313 CLDN4O14493 209 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms