RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ING5Q8WYH8 240 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 DPF3Q92784 378 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 EFCAB11Q9BUY7 163 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 SARDHQ9UL12 918 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 GPR52Q9Y2T5 361 aa13.37□□□□□ -0.27
COL6A1-201ENST00000361866 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 ABHD14A-ACY1A0A1B0GW23 586 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 HHLA1C9JL84 531 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 E7EQ34 232 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 INMT-MINDY4F8WBC2 141 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 CHST10O43529 356 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 PI15O43692 258 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 HCN1O60741 890 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 HTR2BP41595 481 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 NCBP2P52298 156 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF630Q2M218 657 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-201ENST00000361866 AKIRIN2Q53H80 203 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 TMIGD1Q6UXZ0 262 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 B3GNT7Q8NFL0 401 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 HMGCLL1Q8TB92 370 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 PIGXQ8TBF5 258 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 SMG7Q92540 1137 aaKnown RBP13.36□□□□□ -0.27
COL6A1-201ENST00000361866 DNASE1L2Q92874 299 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 LRR1Q96L50 414 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 IL17FQ96PD4 163 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 REEP4Q9H6H4 257 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 C3orf14Q9HBI5 128 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 PCDHGA3Q9Y5H0 932 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 A0A1W2PQL4 384 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF840PA6NDX5 716 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 FAM86C2PA6NEL3 165 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 OR7A17O14581 309 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 CA12O43570 354 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 ISL1P61371 349 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 MAB21L1Q13394 359 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 ZDHHC20Q5W0Z9 365 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 DLEU7Q6UYE1 221 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 HSDL2Q6YN16 418 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 RASSF6Q6ZTQ3 369 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 KLK6Q92876 244 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 RFKQ969G6 155 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 OR2B2Q9GZK3 357 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 LTBP4Q8N2S1 1624 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 C2orf92A0A1B0GVN3 265 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 A0A1W2PPK0 400 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 DAPL1A0PJW8 107 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 CHURC1-FNTBB4DL54 471 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 H3BSH0 61 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 STK25O00506 426 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 OR2B3O76000 313 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 GJA5P36382 358 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 MAGEA11P43364 429 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 MC1RQ01726 317 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL6A1-201ENST00000361866 GDPD4Q6W3E5 623 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF367Q7RTV3 350 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 UHRF1Q96T88 793 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-201ENST00000361866 PIP5K1AQ99755 562 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
COL6A1-201ENST00000361866 CXCL14O95715 111 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 NUDT14O95848 222 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 SLC16A8O95907 504 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 HLA-DQA2P01906 255 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 IL3P08700 152 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 LIPAP38571 399 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 CRISP3P54108 245 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 GP2P55259 537 aaKnown RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 LEXMQ3ZCV2 418 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 OOSP2Q86WS3 158 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 OR10G6Q8NH81 332 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 HSPE1-MOB4S4R3N1 261 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 JUPP14923 745 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 EPHA2P29317 976 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 RGS6P49758 472 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 RNF144AP50876 292 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 KCNC4Q03721 635 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 PYCR3Q53H96 274 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF551Q7Z340 670 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 LKAAEAR1Q8TD35 194 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF717Q9BY31 904 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 SLITRK2Q9H156 845 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 NFKBIL1Q9UBC1 381 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 BTAF1O14981 1849 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 FAM170BA6NMN3 283 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 FAM155AB1AL88 458 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF865P0CJ78 1059 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF24P17028 368 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 PTGER1P34995 402 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF267Q14586 743 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 NCEH1Q6PIU2 408 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 MMAAQ8IVH4 418 aaKnown RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 CELF5Q8N6W0 485 aaKnown RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 RASSF5Q8WWW0 418 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF385DQ9H6B1 395 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 KCNK12Q9HB15 430 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms